| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2658 |
|---|
| Symbol | |
|---|
| ID | 3910451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 3039251 |
|---|
| End bp | 3040036 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637884558 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_486271 |
|---|
| Protein GI | 86749775 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2043] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0762202 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCAG CGATTGCGCC GGAGACATTC GATTTCGCGG TCATGGTCGC CGACCTCAAC
GCGCTGCTGC GGCTGAAGAC CACCGTGATC GGCATGAAGA TGTTCGCGAC CGCCGCCGAG
ATGGAGGCGA TTCCAAAGAT CCGCCGGCCG AACGCGATCC ACACCACCGA CCAGATCGTC
GGCATGGCGT CGCGGCTCGG CTGGACCGTC GGCATCACCG GCAACGATCT GGTCGGCGCG
CAATGCCGCG CGGTGATCGG GCTCGGCCCG CAGGACGAGC AGTGGCTCGA CGGTCGCTCT
TATGTCGGCG TGTGGCATGC GACGCCGGAG GATGCGCGCA AGCGCCAGCA GGCGCTCGAC
GTGGTGCCGT TCGGACAGTA TCAGGCGATG GCGGTGTCGC CGCTGGCGAG CGGTCGGCTC
GATCCGCCCG ATATCTGCCT CGTCTATGCG ACGCCTGGAC AGATGATCAT CCTGATCAAC
GGCCTGCAAT ATGCCGGCTA CAAGAAATTC GAATGGGGCG TCGTGGGCGA GACCGCCTGC
GCGGATTCAT GGGGCAGGGC GCTCCTCACC GGCGAGCCGA GTCTGTCGCT GCCGTGCTTC
GCCGAGCGCC GCTACGGCGG CGTGCCCGAC GAAGAGATGC TGATGGCGCT GAAGCCGGCA
CAACTCGCTA AGGCGATCGA CGGCATGAAG CAGCTCGCCA AGAACGGCCT GCGCTACCCG
ATCGCCCCTT ATGGCATCCA GGCCGACGTC CGCGCCGGGA TGGGGGTGTC GTACGGGAAG
ACGTAG
|
|---|
| Protein sequence | MDAAIAPETF DFAVMVADLN ALLRLKTTVI GMKMFATAAE MEAIPKIRRP NAIHTTDQIV
GMASRLGWTV GITGNDLVGA QCRAVIGLGP QDEQWLDGRS YVGVWHATPE DARKRQQALD
VVPFGQYQAM AVSPLASGRL DPPDICLVYA TPGQMIILIN GLQYAGYKKF EWGVVGETAC
ADSWGRALLT GEPSLSLPCF AERRYGGVPD EEMLMALKPA QLAKAIDGMK QLAKNGLRYP
IAPYGIQADV RAGMGVSYGK T
|
|---|
| |