Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2562 |
Symbol | tig |
ID | 3910352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2939672 |
End bp | 2941030 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637884460 |
Product | trigger factor |
Protein accession | YP_486176 |
Protein GI | 86749680 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.435247 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTCA AGGAAACCGT CGCCGACGGG TTGAAGCGCG AATTCGAAGT CAATGTCCCG GCTGCGGACA TCGACGCCCA GGTCGATGCG CGTCTGGTCG ACCTGAAGGA CAAGGTGAAG CTCAACGGCT TCCGTCCCGG CAAGGTCCCG GTCAGCCATC TGAAGCGCGT CTACGGCCGC TCCGTCGCCG CCGAGACCAT CGACAAGCTG GTCCGCGAGA CCAATGACGG CATCTTCGCC GAGCGCGGCT TCCGCCTCGC CACCGAGCCG AAGATCACGA TGCCGCAGGA CCAGAAAGTG GTCGAGGACA TCCTCGCCGG CAAGTCGGAC CTGAATTACA CCGTCGCGAT CGAAGTGGTG CCGACCATCG AACTCGCCGA CTTCAAGAGC TTCTCGGTCG AGAAGCCGGT GGTCGAGGTT TCGGACTCCG ACGTCGATGA TGCGATCAAG CGGATCGCCG AGGCCAATCG CGCCTATGCC GACAAGGCCG AGGGCGCCAA GGCTGAAAGC GGCGACCGGG TGACGATCTC GTTCAAGGGC TCGATCGAGG GCGTGCCGTT CGACGGCGGC ACCGGCGAGG ACATCCCGGT GGTGATCGGC TCGAACAGCT TCATCCCGGG TTTCGAGGAT CAGCTGATCG GCATCGCCGT CGGCGAGACC CGCACCATCA AGGTGACGTT CCCGACCAAC TATGCCAGCG AGACGCTGGC CGGCAAGCCG GCCGAGTTCG AGACCACCGC GACCAAGGTC GAGGCGCCGC AGGACACCAC GATCGATGAC GAATTCGCCA AGACGCTCGG CATGGAATCG CTCGACAAGC TGAAGGAAGC CGCCAAGGCG CGGCTCGCCG CGGAATACGC CGGCGCCACC CGGCTGCGCG TCAAGCGCCA GCTGCTCGAC CGCCTCGACG AAACCCACAA ATTCGATGCG CCGCCGTCGC TGGTGGAGCA GGAATTCGCC GTGATGTGGC AGTCGATCAA CGCCGAGATG CAGCAGAACG GCAAGAGCTT CGCCGACGAG GACACCACCG AGGAGGCGGC GCGCGAGGAA TATCGCAAGA TCGCCGACCG CCGCGTCCGC CTCGGCCTGG TGCTGTCGGA GATCGGCGAG AAGAACAAGA TCCAGGTCAC CGACGACGAG GTCAGCCGCG CGGTGATCGA GCGCGCCCGG CAGATGCCCG GCCGCGAGAA GGAAGTCTGG GACTTCTACC GCAGCAACGC CGAGGCGCTG GCTCAGCTCC GCGCCCCGAT CTACGAGGAC AAGGTGGTCG ATTTCATCCT CGAACTCGCT ACCGTGACCG AGAAGCCGGT CACCCGCGAG GAACTCTACA AGGACGACGA CGACAAGACC GCCGCCTGA
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Protein sequence | MQVKETVADG LKREFEVNVP AADIDAQVDA RLVDLKDKVK LNGFRPGKVP VSHLKRVYGR SVAAETIDKL VRETNDGIFA ERGFRLATEP KITMPQDQKV VEDILAGKSD LNYTVAIEVV PTIELADFKS FSVEKPVVEV SDSDVDDAIK RIAEANRAYA DKAEGAKAES GDRVTISFKG SIEGVPFDGG TGEDIPVVIG SNSFIPGFED QLIGIAVGET RTIKVTFPTN YASETLAGKP AEFETTATKV EAPQDTTIDD EFAKTLGMES LDKLKEAAKA RLAAEYAGAT RLRVKRQLLD RLDETHKFDA PPSLVEQEFA VMWQSINAEM QQNGKSFADE DTTEEAAREE YRKIADRRVR LGLVLSEIGE KNKIQVTDDE VSRAVIERAR QMPGREKEVW DFYRSNAEAL AQLRAPIYED KVVDFILELA TVTEKPVTRE ELYKDDDDKT AA
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