Gene RPB_2443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2443 
Symbol 
ID3910232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2799269 
End bp2800288 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content67% 
IMG OID637884342 
Producthypothetical protein 
Protein accessionYP_486059 
Protein GI86749563 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.241679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAG CCACCGGTCG ACGGCCACGG CTGCGAACAC GCGCAATGTT CGCACTGATT 
GCGCTGTTCG GAGCGCACGC CGCAACGGCG AGCGCCGCAG AACCGGCCTC CCAGCCCAAC
AGCTGGCCGC CGAAGCTGGT GCGGATCGTG GTGCCGTTCT CGGCGGGGTC GACTCCGGAC
ATGGTGGGCC GCGTGCTGGC CGACAGTCTG CAGGCGCGCC ATCCCGGCGT CAGCTTCGTG
ATCGAGAATA AGCCGGGCGC GGCCGGCAAT ATCGGCACCG ACGCCGTCGC CAAGGCGCGC
CCGGACGGCG CGACGCTCGG TATCTCGATC GCAGGGCCGC TGGTGATCAA CCGGATTCTG
TTCGCGAAGC TGCCCTACGA CCCCGAGCGC GACATCGCGC CGGTGACGAT GCTGACACGG
ATGCCGAGCG TGCTGGCCGT GCCGAGCAGT CTCGGGATCA GCACCGTGTC CGACTTCATC
GCCCGGTTGA AGGACGGCAA CAAAAGCCTC GCTTACGCCT CGATCGGCGC CGGCTCGCTG
TCGCAACTTT GTATGGAGGC GATCGCGCAG AAGGCCGGCG CCAAAATGGT GCACATCCCC
TATGCCGGAT CGCCCAACGC GGTGACCGCG CTGATCCGCG GCGACGTACA GGCCGCCTGC
CTGCCGGCGA TCGCGGTAGC ACCGCAGCAG GCCTCGGGCG CGATCCGGAT TCTGGCCGTG
ACGACGCCGG AAAGGTCGCC GTTTCTGCCG GAGATTCCGA CCTTGAAAGA GAGCGGCATC
GAGGTTCAGT CCGACGCCTG GAACGCGCTG ATCGCGCCGG GCGGAACGCC GCCGGCGCTG
GTCGCTGCGA TCAATGCCGA GTTTCGTCAG TCGCTGTCCG AACCGGCGGT GATCGCGAAG
CTGAAGACCC AGATGATCGT GCCGGCCGCC TCGTCGCCCG ACGAATTGCG CAAGACGCTC
GCCGACGAGA AGTTGCTGTG GGCTGATGTG ATCCGTGCCG CCGGCATCAG GATCGAATGA
 
Protein sequence
MLEATGRRPR LRTRAMFALI ALFGAHAATA SAAEPASQPN SWPPKLVRIV VPFSAGSTPD 
MVGRVLADSL QARHPGVSFV IENKPGAAGN IGTDAVAKAR PDGATLGISI AGPLVINRIL
FAKLPYDPER DIAPVTMLTR MPSVLAVPSS LGISTVSDFI ARLKDGNKSL AYASIGAGSL
SQLCMEAIAQ KAGAKMVHIP YAGSPNAVTA LIRGDVQAAC LPAIAVAPQQ ASGAIRILAV
TTPERSPFLP EIPTLKESGI EVQSDAWNAL IAPGGTPPAL VAAINAEFRQ SLSEPAVIAK
LKTQMIVPAA SSPDELRKTL ADEKLLWADV IRAAGIRIE