| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2427 |
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| Symbol | |
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| ID | 3909561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2784032 |
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| End bp | 2785681 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637884326 |
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| Product | Acyl-CoA dehydrogenase-like |
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| Protein accession | YP_486043 |
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| Protein GI | 86749547 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0516258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGC CGTCTTTCGC GACCCACGAC GTCTTCAACC AGTCGCCGCC TTTCGAGGAG
GTCGATCTGT TCGGGACCGA TCGGCCGCTG GTCGAGGCGG TGACTTTCAA CAATGGCGGT
CATGCCCATG TCGAGCTCGA GGCGTTCGGG CGCAATTGGG GCTCGGCGCA TATGGCCGAG
CGCGGCCGGC TCGCCAACGA GCAGACGCCG AAGCTCAAGA CCTTCGACGC CAAGGGGCTG
CGCCGTGATC AGGTCGAGTT TCATCCCGCC TATCACGAAC TGATGTCCGA GAGCTTCCAC
GCCGGCATCC ACAATTCGAC CTGGGACCAC AACGGCCAGC CGGCCGGCGG CTCGGCCGAA
GTGGTGCGGG CCGCGAAGTT CTACATGGCG GCGCAGGTGG AGACCGGGCA TCTGTGCCCG
GTGACGATGA CGCGCGCCTC CGTGGCTGCA CTTGCCGCGC AGCCGGAGTT GCTTGCGCAG
ATCATGCCGG TTCTGAGCAG CAAGCGCTAC GATCCCGCTT TCGCGCCGTG GTCCGAGAAG
CGCGGCATGA GCGTCGGCAT GGGCATGACC GAGAAGCAGG GCGGCACTGA TGTGCGCAGC
AACGCGACCC GCGCGATCCG CGACGGCGAC GCCTATCGCA TCATCGGCCA CAAATGGTTC
ATGTCGGCGC CGATGTGCGA CGCTTTTCTG GTGCTGGCGC AGGCGGAGGA AGGACTGAGC
TGTTTCTTCA TGCCGCGCTT CAAGCCGGAT GGTTCGATCA ATGACATCCA GTTTCAGCGG
CTGAAGGACA AGCTCGGCAA TCGCTCCAAC GCGTCGTCCG AAGTGGAATT CACCGGCGCT
TATGCGGTGC CGGTCGGCGA GCCGGGGCGG GGCATCCGCA CCATCATCCA GATGGTGCAG
CTCACCCGGC AGGATTGCGC GATCGCCTCC GCAGGCTTGA TGCGGTCCGG GCTCGCGCAC
GCGCTGCATC ACGCCCGCCA TCGCAGCGTG TTCCAGAAGC ACCTCATCGA CCACTCGCTG
ATGCAGTCGG TGCTCGCCGA TATGGCGCTA CAGGTCGAAG CCTCGGTGGC GCTGGTGATG
CGGCTGTGCC GGGCGTTCGA TCAGGCGCCG CACGATCATC TCGAAGCCGC CTATATGCGG
CTGATGACGC CGGCGGTGAA ATACTGGGTG TGCAAATCGG CGCCGCCATT TCTCTACGAG
GCGATGGAGT GCATGGGCGG CAACGGCTAT GTCGAGGACG GCATTCTGGC GCGTCACTAT
CGCGAGGCGC CGGTGAACGC GATCTGGGAA GGCTCCGGCA ATGTGATGTG CCTCGACGTG
CTGCGCGCGA TGTCACGCGA GAGCGACGCA GGCACCGAAG TGCTGCAGAG CCTGATCCAG
GACACTGCCG GCCTGACCGG CGGACCGGCC GCGGCGAGCC TGGTCGCCCG GGCATTCCTG
CAGGCCGACA ACGAGCGCAC CGCGCGGCTC GCGGTCGAGA CGCTGGCGAA ACTCGCCGCC
GCCTCCGCGC TCAGCGAAAT CCACCCCCCG CACGCCGAAC TCTTCGCCCG GACGCGGCTG
ACGCCCGAGC CGGCGACGAT GTACGGCGCG GCCGACCTGT CGGCCGATCA GGCGCAAAGC
TTGCTGGCGC GGGCGCTGCC GGAGATGTGA
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| Protein sequence | MTQPSFATHD VFNQSPPFEE VDLFGTDRPL VEAVTFNNGG HAHVELEAFG RNWGSAHMAE
RGRLANEQTP KLKTFDAKGL RRDQVEFHPA YHELMSESFH AGIHNSTWDH NGQPAGGSAE
VVRAAKFYMA AQVETGHLCP VTMTRASVAA LAAQPELLAQ IMPVLSSKRY DPAFAPWSEK
RGMSVGMGMT EKQGGTDVRS NATRAIRDGD AYRIIGHKWF MSAPMCDAFL VLAQAEEGLS
CFFMPRFKPD GSINDIQFQR LKDKLGNRSN ASSEVEFTGA YAVPVGEPGR GIRTIIQMVQ
LTRQDCAIAS AGLMRSGLAH ALHHARHRSV FQKHLIDHSL MQSVLADMAL QVEASVALVM
RLCRAFDQAP HDHLEAAYMR LMTPAVKYWV CKSAPPFLYE AMECMGGNGY VEDGILARHY
REAPVNAIWE GSGNVMCLDV LRAMSRESDA GTEVLQSLIQ DTAGLTGGPA AASLVARAFL
QADNERTARL AVETLAKLAA ASALSEIHPP HAELFARTRL TPEPATMYGA ADLSADQAQS
LLARALPEM
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