Gene RPB_2409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2409 
Symbol 
ID3909543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2762055 
End bp2762915 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content63% 
IMG OID637884308 
Producthypothetical protein 
Protein accessionYP_486025 
Protein GI86749529 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.186986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGAC CGACGAGCCT TCGCGCGAAT ATGCTGGCGA TGACGATGTT CGGCGCCGCG 
GCGCTGTCCG GCGCGCCCGC GCTCGCCGCT CCGAACGTCT CCTTCCTGCC GCATCAGGCG
CTGTACGATC TCAGTCTGCT GAAGACGCGT AACAACGCCT CGGTCAGCAC CGTGCGCGGT
CGCATCCTGT ACAATTTCTC CGGCAATTCC TGCGAGGGTT ACACCTCGGA TTTCCGTCAG
GTCTCCGAGA TCGAGAGCGG CGAGGGCAAG AACACGCTGA GCGACCTGCG CTCGTCGAGC
TGGGAGGACG CGGCCGGCAA GAGCTATCGT TTCAAGATCG ACACCAAGAT GAACGATGCC
GATCCGACCG ACGTTGACGG CATCGCGGAG CGCACCGGCG ACACCATCAC GGTGAAATTG
AAGCAGCCGG TGCAGAAGAC CTTCACGCTC GATGGCAAGA CGGTGTTCCC GACCGAGCAG
ATCGAACGCA TCATCGCCGC GGCGCGCCAA GGCAAGACGC TGCTCGAGCT GCAGGTCTAT
GACGGCTCCG ACAACGGCGA GAAGGTCTAC AACACGCTGA CCGTGATCGG GCAGCCGATC
CAAGGCGACC GCGCGGCGTC GTCTCCCGAT CCGTCGACCT CGGACGACGC GATGAAGTCG
CTGAAGCGCT GGCCGGTGAC GGTGAGCTAC TACGATCACG CGGCCAAATC CAATTCCGGC
GAGCAGACGC CGGTCTATGC GATGTCGTTC GAATTGTATG AAAACGGCGT GTCGCGCTCG
CTGGTGCTCG ACTACAACGA CTTCGTGCTC GCCGGCGCCA TGGGCAAGTT CGACGTCAAG
TCGAACAAGC CGTGTCAGTA G
 
Protein sequence
MSRPTSLRAN MLAMTMFGAA ALSGAPALAA PNVSFLPHQA LYDLSLLKTR NNASVSTVRG 
RILYNFSGNS CEGYTSDFRQ VSEIESGEGK NTLSDLRSSS WEDAAGKSYR FKIDTKMNDA
DPTDVDGIAE RTGDTITVKL KQPVQKTFTL DGKTVFPTEQ IERIIAAARQ GKTLLELQVY
DGSDNGEKVY NTLTVIGQPI QGDRAASSPD PSTSDDAMKS LKRWPVTVSY YDHAAKSNSG
EQTPVYAMSF ELYENGVSRS LVLDYNDFVL AGAMGKFDVK SNKPCQ