Gene RPB_2372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2372 
Symbol 
ID3909371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2726518 
End bp2726760 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content61% 
IMG OID637884270 
Producthypothetical protein 
Protein accessionYP_485988 
Protein GI86749492 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.862262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.787659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAACAC TCGATAATGT TTCGGTCGAT CTCATGGTGG TGCTCGGCAC CACCTCGATG 
CCCATTCACC AGGTGCTGCG GCTGTCCCGC GGCGCCATCA TCGAACTGGA CGCCACCGAG
GCCGACGAGG TCAAGATCCT CGCCAATAAC ATGCCGGTGG CCAGCGGCGT TGTGCTGGTC
GATCGCAACC GCATCGCGGT CGAGGTCAAA CAGATGTTGA CGCGATCGCC CGATCGACGA
TGA
 
Protein sequence
MPTLDNVSVD LMVVLGTTSM PIHQVLRLSR GAIIELDATE ADEVKILANN MPVASGVVLV 
DRNRIAVEVK QMLTRSPDRR