Gene RPB_2269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2269 
Symbol 
ID3909650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2619081 
End bp2620511 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content65% 
IMG OID637884166 
Productglutamate--ammonia ligase 
Protein accessionYP_485885 
Protein GI86749389 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0828356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.372535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTCTGG TTGAGAAGTA CGGGCTCTGG TCCGACGAAC AGATCGAGGC TGCCGCGAGG 
ATGCGGCAGA CCGCCGAGGA GCATGGTCTC GAGACCATCC GCTTCTCGTT TCCCGATCAG
CACGGCATCC TGCGCGGCAA GACGCTGGTG GCGTCCGAAG CGCTGAACTG CCTCGAATCC
GGCGCCTCCA TCACGACGAC GATGCTGGCC AAGGACACTT CGCACAAGAC GGTGTTTCCG
GTGTTTCAGG CCGGCGGCGG CTTCGGCATG TCGGAGATGC AGGGCGGCGC CGACGCCATC
ATGCTGCCGG ATCCCACGAC ATTCCGCGTG CTGCCTTGGG CGCCGAACAC CGGGTGGGTG
TTGTGCGATC TGTATTTTGC CAATGGTCGC GCCGTTCCGT TCGCGACGCG CGGGCTGTAT
CGCTCGGTGC TGCAGAAACT CGCCGATCGC GGCTACGACT ACATGGCCGG GCTCGAGGTC
GAATTCCACG TCTTCAAGGT CGAGGACGGC AAGATGCGGC CGGAGCACGC CGGCCAGCCC
GGCGAGCCGC CCGAAGTCAG CCTGTTGTCG CACGGTTATC AGTATCTCAC CGAGCAGCGC
TACGATCAGA TGGAGCCGGT GCTCGAACTG ATCCGCCGCG ATATCGTCGC GCTCGGCCTG
CCGCTGCGGT CGATCGAGGT CGAGTTCGGC CCGAGCCAAT GCGAGTTCAC CTTCCAGCCG
ACGGTGGGCT TGATGCCGGC GGACCTGATG GTGCTGTTCC GCAGCGCGGT GAAGCAGATC
TGTCGGCGCC ACGGCTATCA CGCCACCTTC ATGTGCCGCC CGCGTATTCC GAACGTGGTG
TCGTCCGGCT GGCATCTGCA CCAATGCCTG ATCGCGCGTG ACGGCGGCCA CAACGCCTTC
GTGTCGGAGA CGGATGTGCT GTCCGACTTC GGCCGTCACT ACCTCGCGGG GCTGCTGCAG
CATGCCCGCG CCGCGACCGT GTTCACCACG CCGACGATCA ACGGCTACAA GCGCTACCGC
TCCTATTCGC TGGCCCCCGA TCGCGCGATC TGGGGACGCG ACAATCGCGG CGTGATGCTG
CGCGTGCTGG GTGGACCGGG TGATCGCGGC ACGCGGATCG AGAACCGGGT CGGCGAGCCT
GCGGCAAACC CGTATCTTTA CATGGCCTCG CAGATCCTGT CGGGTCTCGA CGGCGTCGAC
CGCGCGCTCG ATCCCGGGCC GTCAGCCGAC ACGCCCTACG AGACCAAGGC GGATCTTCTG
CCCAAATCGC TGCGCGAGGC GATCTTCGCG CTGCGCGACG ATCCGTTCTT CCGCACCGCG
CTGGGCGACG AGTTCGTCGA CTACTACACG TTCATCAAGA ATGCTGAAAT CGAGCGCTTT
CAGGCCGAAG TGACGGAGTG GGAGCAGCGC GAATATTTCG AAATGTTCTG A
 
Protein sequence
MSLVEKYGLW SDEQIEAAAR MRQTAEEHGL ETIRFSFPDQ HGILRGKTLV ASEALNCLES 
GASITTTMLA KDTSHKTVFP VFQAGGGFGM SEMQGGADAI MLPDPTTFRV LPWAPNTGWV
LCDLYFANGR AVPFATRGLY RSVLQKLADR GYDYMAGLEV EFHVFKVEDG KMRPEHAGQP
GEPPEVSLLS HGYQYLTEQR YDQMEPVLEL IRRDIVALGL PLRSIEVEFG PSQCEFTFQP
TVGLMPADLM VLFRSAVKQI CRRHGYHATF MCRPRIPNVV SSGWHLHQCL IARDGGHNAF
VSETDVLSDF GRHYLAGLLQ HARAATVFTT PTINGYKRYR SYSLAPDRAI WGRDNRGVML
RVLGGPGDRG TRIENRVGEP AANPYLYMAS QILSGLDGVD RALDPGPSAD TPYETKADLL
PKSLREAIFA LRDDPFFRTA LGDEFVDYYT FIKNAEIERF QAEVTEWEQR EYFEMF