7 homologs were found in PanDaTox collection
for query gene RPB_2130 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007778  RPB_2130  hypothetical protein  100 
 
 
141 aa  284  2.9999999999999996e-76  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3293  hypothetical protein  71.68 
 
 
148 aa  168  2e-41  Rhodopseudomonas palustris BisB5  Bacteria  normal  hitchhiker  0.00908488 
 
 
-
 
NC_011004  Rpal_3921  conserved hypothetical protein; putative signal peptide  76.4 
 
 
134 aa  149  1e-35  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_2585  twin-arginine translocation pathway signal  58.7 
 
 
143 aa  113  6.9999999999999995e-25  Nitrobacter hamburgensis X14  Bacteria  normal  0.348847  n/a   
 
 
-
 
NC_007406  Nwi_2183  hypothetical protein  56.8 
 
 
129 aa  112  2.0000000000000002e-24  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.684189 
 
 
-
 
NC_007925  RPC_3150  hypothetical protein  57.95 
 
 
139 aa  108  2.0000000000000002e-23  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5238  hypothetical protein  61.25 
 
 
125 aa  108  3e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.155796 
 
 
-
 
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