Gene RPB_2033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2033 
Symbol 
ID3909848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2312767 
End bp2313267 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content65% 
IMG OID637883926 
Producttripartite tricarboxylate transporter TctA 
Protein accessionYP_485651 
Protein GI86749155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.312711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CGCCGAGCGG GATCTCGGAC AAATCCCTGT TTCCGAAATG GATTCGCGGA 
CCGCAGGATT TCATCGGCGG CCTCGCTCTG GTGGCGGTGG CTGCCTTCGC GCTGTGGGCA
TCGAGCGATC TTCAGGGCAT GCAGGGCTTT TCGTTCGGCG CCGGCACGGC GCCGCGGATC
TTCGCGCTGC TGCTGCTCGG GATCGGCATC GTCCTCACGG TGACCGCCGT CCTCGTCGAC
GGCGAACCGA TGGCGAAATT TCACTGGCGC GGACCTTTGT TCGTCGGCCT CGCCATCCTG
TGTTTCGCCG TCTCGATTCG CCCGCTCGGA CTGATCATCT CCGCCTTCGC CAGCTTCCTG
ATCGCCGCGC TCGGAACCCC CGAGACGCGT TGGAAGGAAA CCGTCCTCGT CGGCATCGCG
CTGACGATCG GCTGCAGCCT GCTGTTCCCC TATGCGCTGG GGCTGCCGAT GCCGCTGTAT
CCGTCTGTCC TGATCCGGTG A
 
Protein sequence
MSDTPSGISD KSLFPKWIRG PQDFIGGLAL VAVAAFALWA SSDLQGMQGF SFGAGTAPRI 
FALLLLGIGI VLTVTAVLVD GEPMAKFHWR GPLFVGLAIL CFAVSIRPLG LIISAFASFL
IAALGTPETR WKETVLVGIA LTIGCSLLFP YALGLPMPLY PSVLIR