| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2009 |
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| Symbol | |
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| ID | 3909515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2285847 |
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| End bp | 2287136 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883903 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_485628 |
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| Protein GI | 86749132 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.175256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.467375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGGCA AGACCGGTAG AACCTTCGCG ATCGACCCCG GCCGGATCGA CCGGCCGCCG
TCGAAACTGC TGCTGCTCCT GCTGGTGCTG ATGAACGGCG CGGCGCCGAT CGCGCTGTAC
ATCTTCGTGC CGGCGCTGCC GGTGCTCGCC AGCGATCTCG GCGGCGACAT CTCGGTCGCG
CAGATGACGG TGTCGCTCTA CATGGTCGGG CTGGCGTGCT CGCAACTGAT CATGGGCCCG
CTGTCGGACC GGTTTGGCCG CCGCCCGGTG CTGCTCGGCG GCTTGACGCT GATGGTCGCC
GCCAGCGTCG GCTGCATCTT CGCCGAGACC CTGCCGCAAC TGATCGCCGC GCGGTTCCTG
CAGGCGCTCG GCGGCGCTTC CGGCATGGTG ATCAGCCGCG CCATCATCCG CGATCTGTAC
AGCCGCGACC GCGTCGGCGG CATGCTCAGT CTCGTCATCG CCGTGATGAT GATCGCGCAG
ATGCTGAGCC CGCTGTTCGG CGGCGTGATC GAAACCGCGC TCGGCTGGCG CGCGATCTTC
TACGTCGTCA CGGCGGGCGC GATCGCCGTC ACGGCGACGA TCGCGCTGGC GCTGCCCGAG
ACGCGCCGCC GCCTCGGTCC CGCCGCACCG GGCGGCTTCC GCGGCGATGT CGGCGGCCTG
TTCAGGAGCC GCGCCTTCAT CGGCTATGTG CTTTGCCAGG TGCTGGCCTC GGCGATCATC
TTCACCTTCG CCGGCGGCGG GCCGTACGTC GTGGTGACGC AGATGGGCCG CAGTTCGGCC
GAATACGGCG CCTGGTTCGC CAGCTCCGGC TTCGCCTATC TGCTCGGCAA TCTGTTCTGC
GTGCGGTTCG CGCCGCGCTA TTCGCTCGAC AAACTGATCT GGTTCGGACT GGCGATGCAG
ATCGGCGGCG CGGCGCTGAA TCTGGCGTGG GGCGTGCTCG GCTGGAATCA GGTGCCGAGC
TGGCTGTTCG CCACCCACAT GATCATCATG TTCGGCAACG CCTTCGTGAT GGCCAATGCA
ACCGCCGGCG CGATCAGCAT AAGGCCGCAG GTGGCCGGCA CCGCTTCCGG GCTGATGGGC
TTCACCCAAT TCGGGATCGG CGCGCTGTGC TCGCAGTTCG GCGCGTATCT CGGCGGCCAT
TTCGCCACGC CGCTGCCGCT CAACATCGCC GTCGCCGCCC TCGCGCTGGC CTGCGCCGCC
TCGATGATCT TCCTGGTGCC ACGCAGCAAC CTCATCGCGA GCGAAGAGCT GATCGAGAAG
GCAGAAGGCG AAGAGCCGCC GGTGATGTGA
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| Protein sequence | MHGKTGRTFA IDPGRIDRPP SKLLLLLLVL MNGAAPIALY IFVPALPVLA SDLGGDISVA
QMTVSLYMVG LACSQLIMGP LSDRFGRRPV LLGGLTLMVA ASVGCIFAET LPQLIAARFL
QALGGASGMV ISRAIIRDLY SRDRVGGMLS LVIAVMMIAQ MLSPLFGGVI ETALGWRAIF
YVVTAGAIAV TATIALALPE TRRRLGPAAP GGFRGDVGGL FRSRAFIGYV LCQVLASAII
FTFAGGGPYV VVTQMGRSSA EYGAWFASSG FAYLLGNLFC VRFAPRYSLD KLIWFGLAMQ
IGGAALNLAW GVLGWNQVPS WLFATHMIIM FGNAFVMANA TAGAISIRPQ VAGTASGLMG
FTQFGIGALC SQFGAYLGGH FATPLPLNIA VAALALACAA SMIFLVPRSN LIASEELIEK
AEGEEPPVM
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