Gene RPB_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1965 
Symbol 
ID3908045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2232853 
End bp2233554 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content71% 
IMG OID637883859 
ProductErfK/YbiS/YcfS/YnhG 
Protein accessionYP_485584 
Protein GI86749088 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.575279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATT TCCAGCTGAT CCGCCGCACT GCCGCGATCG CTGCATTCGC GATCGGGGCC 
GTCGCCCTGA CCGGAGCGGC CCAGGCCGCC CAGCCGCTGC CCTTCCCGTT CCTGCCGCTG
CTGCCGCAGC CGGCCGCGCT GCAGCCGGCG GCGCTGGCGC CGCAGGTCCA GGCCGTGCCG
CAGGACGAGG ACGACGACGC GTCCGCCGCC GAAATGCCGG CGCGTCTGAA GCGCCAGATC
GTCAGCTACG CCACCCGCGA GGCGCCGGGC ACGATCGTGA TCGATACTCC GAACACTTAT
CTCTACTACG TGCTCGGCGG CGGCCGCGCG ATCCGCTACG GCATCGGCGT CGGCCGCGAC
GGCTTCACCT GGTCGGGCGT GCAGTCGATC ACCCGCAAGG CGGAGTGGCC GGACTGGACC
CCGCCGCCGG AGATGATCGC CCGCCAGCCC TATCTGCCGC GCCACATGGC CGGCGGCCCC
GGCAATCCGC TCGGCGCCCG CGCGATGTAT CTCGGCGGCA CGATCTATCG CATCCACGGC
ACCAACGCGC CGTCGACGAT CGGCACCCAC GTCTCGTCCG GCTGCATCCG GCTCACCAAT
GACGACGTCA CCGACCTGTA TGGCCGGGTC AATGTCGGCG CCAAGGTGAT CGTGCTGCCC
GACAACCGCC GCGCCGACAA TTCAAGCGGC CGCCGCGGTT AG
 
Protein sequence
MTHFQLIRRT AAIAAFAIGA VALTGAAQAA QPLPFPFLPL LPQPAALQPA ALAPQVQAVP 
QDEDDDASAA EMPARLKRQI VSYATREAPG TIVIDTPNTY LYYVLGGGRA IRYGIGVGRD
GFTWSGVQSI TRKAEWPDWT PPPEMIARQP YLPRHMAGGP GNPLGARAMY LGGTIYRIHG
TNAPSTIGTH VSSGCIRLTN DDVTDLYGRV NVGAKVIVLP DNRRADNSSG RRG