| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1955 |
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| Symbol | |
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| ID | 3908034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2222731 |
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| End bp | 2223339 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883849 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_485574 |
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| Protein GI | 86749078 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTATC CTGATCGCTT CTATCCCGTC GTCGACAGCA TCGCGTGGGT CAAACGCCTC
GCCGCGCTCG GCGTCGGCAC CGTGCAACTC CGCGCCAAGG ACCTCGACGA CGGCGCCGCG
CTGCAGCTCG TCACCGACGC GCTCGACGCG GTGAAAGGCA CCAGCGTCAG GCTGATCATC
AACGACTACT GGCGCGCCGC GATCGTCGCC GGCGCGCAGC ATCTGCATCT CGGCCAGGAA
GACCTCGCGA CCGCCGATCT GCACGAGATC CGCGCCGCCG GGCTGACGCT CGGCCTGTCG
ACCCACGACG ACGCCGAACT CGAAACCGCG CTGGCCGCGC GCCCGGACTA CATCGCGCTC
GGCCCGATCT TTCCGACCAC GCTGAAATCG ATGCGCTTCG CCCCGCAGGG CATCCCGAAG
ATCACCGACT GGAAGCAGCG CGTCGGCAGC ATCCCGCTGG TGGCGATCGG CGGCATCAAG
CTGGAACAGG CCGAAGAGAT CTTTGCCGCC GGCGCCGACT CGATCGCGGT GGTGAGCGAC
GTGACGCAGA ACCCCGATCC AGACGCCCGC GTCCGCGCCT GGCTCGATTT CGTCGCGGAG
ACGGCGTGA
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| Protein sequence | MPYPDRFYPV VDSIAWVKRL AALGVGTVQL RAKDLDDGAA LQLVTDALDA VKGTSVRLII
NDYWRAAIVA GAQHLHLGQE DLATADLHEI RAAGLTLGLS THDDAELETA LAARPDYIAL
GPIFPTTLKS MRFAPQGIPK ITDWKQRVGS IPLVAIGGIK LEQAEEIFAA GADSIAVVSD
VTQNPDPDAR VRAWLDFVAE TA
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