Gene RPB_1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1823 
Symbol 
ID3908982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2085692 
End bp2086498 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content63% 
IMG OID637883717 
Producthypothetical protein 
Protein accessionYP_485442 
Protein GI86748946 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.349261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.228948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCGT CATCGGTCGG GGCGGTTTCA GAGTTGCTCA AGACGTTACT GCCGAAAGAT 
GGAACTCCGG TGCTGAACCG GGTGTTGCGG GTGATGTTGG CTCGCGAACT CGGCCGATCG
ATCGACGATG AAATCTACGA GCAGGCGCGC GACCAACTGT TCGCGGCCGG GCAGATCGGG
CGGGTTCGCG GCCAAGGCGG ACAGATATTT CTCGCCAAGA GCGAACTCGG TCGCCCCCAG
GAAAAGCCCG ACACCCGTTC CGCCCGCACC GAGGCCGAGT TGATGGCGCC GCTCGGGCGC
TATCTTAGGG GAGCGTTCGT GCGGGAACTC GACATCCCCG ACCATGGCGC ATCACTGATC
AAGGATACGT CTCGACTCGG CCCGCCGCTG GCGCGCTGGG CCCGCCCGGA TTTCATCCTG
GTGACGGCGA TGCGTTTCCG GTTCATGCCG GGCGCGCAGC TCGATGTCTA TTCGTTCGAA
TTGAAGGCCG AGCACGGCGC CACCGATCTG GCGGTCTACG AGGCCCTCGC GCAAACCCGC
TTTACCCATT TCGGTTATCT GGTCTGGCAC TTGCCTGAGA CATCGAAGGC CGAAGCCAGG
CTGCCGGAGA TCACCGCGCA ATGCAGCCAG CATGGCGTTG GCCTGATCCG CATCCACGAC
CCGGACAGCG ACGAGGCATT TGAGACGCTG CTCGATCCGG TGCGCAAAGC GACGCCTCCA
GCAGAAGTCG ACGGCTTCCT GGAGCAACGG CTCGATGAGC ACGAACGCAT GACCTTGCTG
AGAGCGCTCG ACGGAGATCG GCCATGA
 
Protein sequence
MRASSVGAVS ELLKTLLPKD GTPVLNRVLR VMLARELGRS IDDEIYEQAR DQLFAAGQIG 
RVRGQGGQIF LAKSELGRPQ EKPDTRSART EAELMAPLGR YLRGAFVREL DIPDHGASLI
KDTSRLGPPL ARWARPDFIL VTAMRFRFMP GAQLDVYSFE LKAEHGATDL AVYEALAQTR
FTHFGYLVWH LPETSKAEAR LPEITAQCSQ HGVGLIRIHD PDSDEAFETL LDPVRKATPP
AEVDGFLEQR LDEHERMTLL RALDGDRP