Gene RPB_1814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1814 
Symbol 
ID3908973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2075446 
End bp2076186 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content64% 
IMG OID637883708 
Producthypothetical protein 
Protein accessionYP_485433 
Protein GI86748937 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.570912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.560368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCCG CCCGGCAGGG ACAGCAGGAG GGCCGCGTTG CCGTCCGCCG ACGTGAGTTG 
CTCGACAAGG TCGAGTATCG GCTGGCCGAG ACGGACGCCG AGCGCGCCGC GATCTACCGA
CTGCGGTACC GCGCCTATCT GAAAGAGGGC GCGATCGATC CGAACCCCCA GGGCATCGTG
TCCGATCGCT ATGACAACCT GCCGAACTCC TGGATCTTCG GGATCTTCTT CGAGGGGGAG
CTGACCAGCT CGCTCAGAAT CACGGTGGCG TCGCCGGACA ATCAGGCTTG TCCGTCGATG
GACGTGTTTC CCGATCTGCT CGAGCCTTGG CTTTCGGACG GCAAGGTGAT CGTCGATCCG
ACCCGGTTCG TCTCCGATCC CGATCGCACC AATCGGGTGC CCGAGCTCGC TTATCTGACC
TTGCGGCTGG CCTATGTGGC TTGCGAGCAC TTTCGTGCCG ACATCGGGCT GGCCTCGGTG
CGCGCCGAGC ACCAGGCTTT CTATCGCCGC GTGTTCATGA GCGCGGTCTG CCCGCCGCGG
GTGTATCCTG GCCTGAAGAA GCCGATCGGG CTGATGGAGA TCGATTTCCC CGTCACGCAT
ATGAAGGTGT TTGCGCGCTA TCCGTTCTTG CGCTCGACGG CCTTCGAACG ACACAAGCTG
TTCACGCGGA CGACGGCGCG ATCCGCGTCG CCCCGGCTCG CCGAGGTTCC CTTCGCCACG
ATCGACCACC AGCACATCTA G
 
Protein sequence
MDAARQGQQE GRVAVRRREL LDKVEYRLAE TDAERAAIYR LRYRAYLKEG AIDPNPQGIV 
SDRYDNLPNS WIFGIFFEGE LTSSLRITVA SPDNQACPSM DVFPDLLEPW LSDGKVIVDP
TRFVSDPDRT NRVPELAYLT LRLAYVACEH FRADIGLASV RAEHQAFYRR VFMSAVCPPR
VYPGLKKPIG LMEIDFPVTH MKVFARYPFL RSTAFERHKL FTRTTARSAS PRLAEVPFAT
IDHQHI