Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1814 |
Symbol | |
ID | 3908973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2075446 |
End bp | 2076186 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637883708 |
Product | hypothetical protein |
Protein accession | YP_485433 |
Protein GI | 86748937 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.570912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.560368 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCCG CCCGGCAGGG ACAGCAGGAG GGCCGCGTTG CCGTCCGCCG ACGTGAGTTG CTCGACAAGG TCGAGTATCG GCTGGCCGAG ACGGACGCCG AGCGCGCCGC GATCTACCGA CTGCGGTACC GCGCCTATCT GAAAGAGGGC GCGATCGATC CGAACCCCCA GGGCATCGTG TCCGATCGCT ATGACAACCT GCCGAACTCC TGGATCTTCG GGATCTTCTT CGAGGGGGAG CTGACCAGCT CGCTCAGAAT CACGGTGGCG TCGCCGGACA ATCAGGCTTG TCCGTCGATG GACGTGTTTC CCGATCTGCT CGAGCCTTGG CTTTCGGACG GCAAGGTGAT CGTCGATCCG ACCCGGTTCG TCTCCGATCC CGATCGCACC AATCGGGTGC CCGAGCTCGC TTATCTGACC TTGCGGCTGG CCTATGTGGC TTGCGAGCAC TTTCGTGCCG ACATCGGGCT GGCCTCGGTG CGCGCCGAGC ACCAGGCTTT CTATCGCCGC GTGTTCATGA GCGCGGTCTG CCCGCCGCGG GTGTATCCTG GCCTGAAGAA GCCGATCGGG CTGATGGAGA TCGATTTCCC CGTCACGCAT ATGAAGGTGT TTGCGCGCTA TCCGTTCTTG CGCTCGACGG CCTTCGAACG ACACAAGCTG TTCACGCGGA CGACGGCGCG ATCCGCGTCG CCCCGGCTCG CCGAGGTTCC CTTCGCCACG ATCGACCACC AGCACATCTA G
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Protein sequence | MDAARQGQQE GRVAVRRREL LDKVEYRLAE TDAERAAIYR LRYRAYLKEG AIDPNPQGIV SDRYDNLPNS WIFGIFFEGE LTSSLRITVA SPDNQACPSM DVFPDLLEPW LSDGKVIVDP TRFVSDPDRT NRVPELAYLT LRLAYVACEH FRADIGLASV RAEHQAFYRR VFMSAVCPPR VYPGLKKPIG LMEIDFPVTH MKVFARYPFL RSTAFERHKL FTRTTARSAS PRLAEVPFAT IDHQHI
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