| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1797 |
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| Symbol | |
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| ID | 3908878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2058975 |
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| End bp | 2059739 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637883691 |
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| Product | ABC transporter related |
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| Protein accession | YP_485416 |
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| Protein GI | 86748920 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
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| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.131538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.177117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGC TGGAAACCCG CACCACCTCG GCGATGCTGT ATCTCGACGG CGTCCACGTC
TCGTTCGACG GCTTCCACGC CATCAACAAT CTGTCGCTGA CGCTCGAGCC CGGCGAGATG
CGCGCCATCA TCGGCCCGAA CGGCGCCGGC AAGACCACGA TGATGGACAT CATCACCGGC
AAGACCAAGC CGGACAAAGG CGAGGTGGTG TTCGACGGCA CGGTGGATCT GACCAAGCTC
GACGAGACCC GGATCGCCAC GCTCGGCATC GGCCGCAAAT TCCAGAAGCC GACGGTGTTC
GAAAGCCAGA CCATCGAGGA CAATCTGCTG CTGGCGCTCA ATGTCGATCA CCGCGTCCGC
GGCACGCTGT TCTGGCGGCG CAGCGAGCCC GAGAGCAAGC GGATCGACCG CGTGCTGGAG
ATCATCAAGC TCGGCGACGC GCGCGACCGG CTCGCCGGCT CGCTGTCGCA CGGCCAGAAG
CAATGGCTCG AAATCGGCAT GCTGCTGGCG CAGGACCCGA AACTGTTACT GGTCGACGAG
CCGGTGGCCG GCATGACCGA CGTCGAGACC CATCAGACCG CCGAACTCCT GAAAGAGATC
AACAGCCACG ACAAGACCGT CGTGGTGGTC GAGCACGACA TGACCTTCGT GCGCGAACTC
GGCGTCAAGG TGACGTGCCT GCACGAAGGC ACCGTGCTGG CGGAAGGAAG CATCGACGAC
GTCTCGGCGA ACGAGCGTGT CGTCGAAGTG TATCTGGGGC GGTGA
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| Protein sequence | MSLLETRTTS AMLYLDGVHV SFDGFHAINN LSLTLEPGEM RAIIGPNGAG KTTMMDIITG
KTKPDKGEVV FDGTVDLTKL DETRIATLGI GRKFQKPTVF ESQTIEDNLL LALNVDHRVR
GTLFWRRSEP ESKRIDRVLE IIKLGDARDR LAGSLSHGQK QWLEIGMLLA QDPKLLLVDE
PVAGMTDVET HQTAELLKEI NSHDKTVVVV EHDMTFVREL GVKVTCLHEG TVLAEGSIDD
VSANERVVEV YLGR
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