Gene RPB_1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1721 
Symbol 
ID3908246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1963173 
End bp1963670 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content65% 
IMG OID637883615 
Producthypothetical protein 
Protein accessionYP_485340 
Protein GI86748844 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0457943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0688647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC TTCGGTCATC ATCTTCGCTT CATGCCTTGA AGGCCGCCGG CGTCGCGGCG 
GCGATGCTGC TGTCGGCCTC GGCCAGCTAC GCAGAAGGAC CGTTCGCCGG ATTTGAAGGT
GCATGGTCGG GCACTGGCAC GGTCGCCTTG TCCGACGGCT CCAAGGAGCG CATCCGTTGC
AAGGCGACCT ACAAGGTCGG CGGCGGCGGC AACCAGCTCG CGCAGACGCT GCGCTGCGCA
AGCGACAGCT ACAAATTCGA CCTGACCGCC GACGTCGCCA GCAACGGCGA CCGGATCTCC
GGCAACTGGA GCGAGGCCAG CCGCAACATC AACGGCAATC TGCAGGGCAA GGCCGGCGGC
GGCAATATCG AAGTCTTCGT CGAGGCCGCC GGTTTCGCCG CCAGCATCTC GCTGACGACG
CGCGGCAACA AGCAGTCGGT CGCGATCAGC TCCAAGGGCG ACATCCGCGG CGTCAACATC
AGCATGACCA AGGGCTGA
 
Protein sequence
MKLLRSSSSL HALKAAGVAA AMLLSASASY AEGPFAGFEG AWSGTGTVAL SDGSKERIRC 
KATYKVGGGG NQLAQTLRCA SDSYKFDLTA DVASNGDRIS GNWSEASRNI NGNLQGKAGG
GNIEVFVEAA GFAASISLTT RGNKQSVAIS SKGDIRGVNI SMTKG