Gene RPB_1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1680 
Symbol 
ID3908667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1912295 
End bp1913140 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content69% 
IMG OID637883574 
Producthypothetical protein 
Protein accessionYP_485299 
Protein GI86748803 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGC GTTTTCCGAT CCGTGCCGGC GTCGCCGCGT CCGTTCTGGC TCATCTCGGG 
CTGGTCGGTG CGGTGCTGTT GTTCGCGGAG GTTCGGCCGT TCGCGGAGGT GCCTGAGCAG
CGCATCGAAG TCGACGTCGT CACCGCCGAC GAGGCGCCCC CGGCTCCGGA GCCGGTGGCA
AAGACCAAGC CGGCGCTGGA ACTGCCCGAA TTCAAACCGA CCGCGGAATC CGAACCGGCT
GCGCAACAAC CGCCGGCGAA GTCCGAACCC GCGCAGAAGC AGGAACCCGC CAAACCAGAA
CCCGCAAAGC CGGAGCCTGT CCAGAAGCAG GCCACCGCAC CCAAGCCGGA GCCGCCAAAA
GCCGAGCCGC CGCCGCCGCC AGCGCCGACA CCGCAAGCGC AGCAGCAGGC CCAACCGCCC
ACGCCTGCGC CGTTCCCCCC CGCGATCGCT CAGGAGCCGG ACCTCACGGT GAAATACTCC
GTGGCGCTTG GCCTGCCGAC CGATCCCGCC TTCGACGGGC CGGCGGAGAT CGCCGCCGAT
ATCAGCGCTG ACGCGGTTGC GGCGTTGCGG CAGCGCATCA AATCCTGCGC GGCATTGCCG
GCCTCGGTCG GGCCGTCCGA CAATGTGCGG ATCGTGCTGC GGGTCGCGCT GTTGCCGGAC
GGACGATTGG CCCAGGAGCC GATCCTGATC GAGGCCAGCG CCTCGACGAA GGGCCCGGCG
CTGATGCAGG GCGCGATCGA CGCGCTGGTC AAATGCCAGC CCTACGCCAT GCTGCCCAAC
GACAAGTACA AGGACTGGAA ATTGCTCGAC ATCGGCTTCA CGCCGCAGGA TTTCCGCGGC
GGCTAG
 
Protein sequence
MTLRFPIRAG VAASVLAHLG LVGAVLLFAE VRPFAEVPEQ RIEVDVVTAD EAPPAPEPVA 
KTKPALELPE FKPTAESEPA AQQPPAKSEP AQKQEPAKPE PAKPEPVQKQ ATAPKPEPPK
AEPPPPPAPT PQAQQQAQPP TPAPFPPAIA QEPDLTVKYS VALGLPTDPA FDGPAEIAAD
ISADAVAALR QRIKSCAALP ASVGPSDNVR IVLRVALLPD GRLAQEPILI EASASTKGPA
LMQGAIDALV KCQPYAMLPN DKYKDWKLLD IGFTPQDFRG G