| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1662 |
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| Symbol | |
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| ID | 3908649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1890424 |
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| End bp | 1892337 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883556 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_485281 |
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| Protein GI | 86748785 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACTGA TATTGGTCCA GGCCCTCAGC GGTCTCGCCA GCGCCGCGTC GCTGTTCCTG
GTCGCATCCG GGCTCTCGAT CATCTTCGGC GTCACGCGCA TCGTGAACTT CGCGCACGGC
GCGTTCTACA TGCTCGGCGC CTATGTCGCC TTCACGCTGA CCGACCGCTT TTCCGGCCCG
CTCGGCTTCT GGGGCGGACT GCTCGCCGCC AGCCTGATCG TGGCGGTGCT CGGCGCGCTG
ATGGAGATGG TGCTGCTGCG CCGCATCTAT CACGCGCCCG AGCTGTTCCA ATTGCTCGCC
ACCTTCGGCG TGACGCTGAT GGTACAGGAC ATCGTGGTGC TGATCTGGGG CGCCGACGAT
CTGATGGGGC CGCGCGCGCC CGGCTTCGCC GGCGCCTTCA GCCTGTTCGG ACGCCTGGTG
CCGACCTACG ACATCCTGCT GATCGTGCTC GGTCCGGTCG TACTCGGCGC ATTGTGGCTG
TTGTTCCACC GCACCCGCTG GGGCGTGCTG GTGCGCGCCG CGACACAGGA CCGCGACATG
GTCGCCTGCC TCGGCGTCAA TCAGAAGTGG CTGTTCACCA GCGTGTTCGC ACTCGGCTGC
TTCCTCGCCG CGCTCGGCGG CGCGCTGCAG ATCCCGCGCA CCACCGTGAC CCACTACATG
GACCTGTCGA TCATCGTCGA GGTGTTCGTG GTGGTGGTGA TCGGCGGGCT CGGCTCGGTC
ACCGGCGCCT TCATCGCCGC GGTTCTGGTG TCGGAATTGA ACGCGCTCGG CATTCTGGTG
CTGCCGAAGA TCTCGCTGAT CGCCGTGTTC CTGGTGATGG CGGTGGTGCT GGTGGTGCGG
CCCTACGGAC TGCTCGGCAA GGCCGAACGC GGCGCCCGCG CCAGCGCCGG GATCTCGTTC
CGGCCCTGGA AGCCGCTGTC GCAATGGGAG CGCATCGGCG CCGCGGTCGT CGTCGTCATC
GCGGCCTGCC TGCCCTTGGT CGCCGGCAAC TATCTGTTGA GCGTCGGCGC GGAGATCCTG
GTGTTCGTGC TGTTCGCCGC CAGCCTGCAC TTCATGATGA CAGTGGGCGG GTTGGCATCG
TTCGGCCACG CGGCGTTTTT CGGCCTCGGC GCCTATGGCG CGGCGTTCGC CGTCAAGTTT
CTCGGCGCCC CGATGGAGGT CGCGCTGCTC GTCGGCCCGT TGTTCGGCCT GCTCGGCGCG
GTGGTGTCGG GCTGGTTCTG CGTGCGGCTG TCGGGTGTGT ATTTCGCCAT GCTGACGCTG
GCCTTCGCCC AGATCATCTG GTCGATCGCG TTCCAGTGGG TCGAGGTGAC CGGCGGCGAC
AACGGCATTC TCGGGATCTG GCCCTCGGCC TGGGCGTCGA CCCCGCAAGG CTTCTTCTGG
CTCACGCTCG GCGTGGTCGT CGCGGGCGTC GCACTGCTGC GGATGCTGGT GTTCTCGCCG
TTCGGCTTCG GTCTGCGGGC GACGCGCGAC AATACGCTGC GCTCGGAGGC GATCGGCATC
GACCGCAAGT CGGTGCAGTG GGCCGCGCTG ATCGTCGCCG GCACCTTCGC CGGCGTCGCC
GGCGCGCTGT TCGCCTTCCT CAAGGGCTCG GTGTTTCCGG AATCGCTGGC GATCCCGATC
TCGGTCGACG GATTGGTGAT GGTGCTGCTC GGCGGCATCG AAACGGTGTC GGGCGCGGTG
GTCGGCGCGA TCGTCTACAA GGCGCTGGCG ATCTGGCTGA TGAGCCAGAC CGACCTCTCC
AAGCTCGTGC TCGGCGCGAT CATCGTGCTG CTGGTGGTGG CTGCGCCCAA GGGCATCGTC
GGTTTCATCG AGGATTGGCG GCATCGCCGG CCGCCGGCGC CGAACGGCGC CGGGCCGAAG
CCGGCCGGCA AATCCGACGC GCTCGGGATC GCCAAGATGG AGGCCGCCGA ATGA
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| Protein sequence | MELILVQALS GLASAASLFL VASGLSIIFG VTRIVNFAHG AFYMLGAYVA FTLTDRFSGP
LGFWGGLLAA SLIVAVLGAL MEMVLLRRIY HAPELFQLLA TFGVTLMVQD IVVLIWGADD
LMGPRAPGFA GAFSLFGRLV PTYDILLIVL GPVVLGALWL LFHRTRWGVL VRAATQDRDM
VACLGVNQKW LFTSVFALGC FLAALGGALQ IPRTTVTHYM DLSIIVEVFV VVVIGGLGSV
TGAFIAAVLV SELNALGILV LPKISLIAVF LVMAVVLVVR PYGLLGKAER GARASAGISF
RPWKPLSQWE RIGAAVVVVI AACLPLVAGN YLLSVGAEIL VFVLFAASLH FMMTVGGLAS
FGHAAFFGLG AYGAAFAVKF LGAPMEVALL VGPLFGLLGA VVSGWFCVRL SGVYFAMLTL
AFAQIIWSIA FQWVEVTGGD NGILGIWPSA WASTPQGFFW LTLGVVVAGV ALLRMLVFSP
FGFGLRATRD NTLRSEAIGI DRKSVQWAAL IVAGTFAGVA GALFAFLKGS VFPESLAIPI
SVDGLVMVLL GGIETVSGAV VGAIVYKALA IWLMSQTDLS KLVLGAIIVL LVVAAPKGIV
GFIEDWRHRR PPAPNGAGPK PAGKSDALGI AKMEAAE
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