| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1650 |
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| Symbol | |
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| ID | 3909927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1879388 |
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| End bp | 1880359 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637883544 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_485269 |
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| Protein GI | 86748773 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.950445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCAT TCATTGCCCA GAGAATCGGC AAGGCCGTGG TCGTCTTGCT CGCGATCGTC
GTGCTCAACT TCTTCCTGAT CCGCCTTGCG CCCGGCGATC CGGCATTGGT GATGGCCGGC
GAAGCCGGCG CGGGCGATCA GCTCTTCATC TCCCAGCTCC GCGAGAAATT CGGCCTCGAC
AAGCCGATGC CGGTGCAGCT CTTTCTATAC GTCAAGGGAA TCCTCAGTTT CGATCTCGGC
TATTCCTTCC GCCAGCAGAT GCCGGTGTCA AAGCTGATCC TCGACCGGCT GCCGGCGACG
ATGCTGCTGA CCGGCACGGC TTTTGCGATC TCGCTGGCGT TCGGCATCAT GTTCGGCGCG
CTGGCGGCGC GGCGGGCCGG CACCTGGGCG GACACGGCGA TCACCGTGCT GGCGCTGATC
TTCTACGCCA CGCCGCTGTT CTGGATCGCG CTGATGGCGA TCCTGCTGTT TTCGGTCACG
ATGGAATGGC TGCCGAGCTT CGGCTACAAG ACGGTCGGCG CCAACTACAC CGGTCTCGCC
CACGTCCTCG ACGTCGGAGC CCACCTGATC TTGCCGGCGA CGACGATCGG CCTGTTCTTC
ATGGCCACTT ATGCCCGCAT GACGCGCGCC TCGATGCTCG AGGTCAAGCG GCTCGATTTC
GTCAAGACGG CGCGCGCCAA GGGCCTGCGC GACGCCGTGA TCCAGCGTCG CCACGTGCTG
CGCAACGCGC TGCTGCCGGT GGTGACGCTC GCCGGCCTGC AGGCCGGCAC ATTGGTCGGC
GGCGCCGTGC TCACCGAAAC CGTGTTCGCC TGGCCGGGCA TCGGCCGGCT GATGTACGAG
GCTCTGTTGC AACGCGACTA CAACCTGTTG CTCGGCGTCT TCGTGGTGTG TTCGGCGATG
GTGCTGGTGT TCAACCTGAT CACCGACCTG ATCTACCGCT CGGTCGATCC CCGTATCGAG
TACGCGGCAT GA
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| Protein sequence | MLAFIAQRIG KAVVVLLAIV VLNFFLIRLA PGDPALVMAG EAGAGDQLFI SQLREKFGLD
KPMPVQLFLY VKGILSFDLG YSFRQQMPVS KLILDRLPAT MLLTGTAFAI SLAFGIMFGA
LAARRAGTWA DTAITVLALI FYATPLFWIA LMAILLFSVT MEWLPSFGYK TVGANYTGLA
HVLDVGAHLI LPATTIGLFF MATYARMTRA SMLEVKRLDF VKTARAKGLR DAVIQRRHVL
RNALLPVVTL AGLQAGTLVG GAVLTETVFA WPGIGRLMYE ALLQRDYNLL LGVFVVCSAM
VLVFNLITDL IYRSVDPRIE YAA
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