Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1618 |
Symbol | |
ID | 3909895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1824387 |
End bp | 1825055 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637883513 |
Product | hypothetical protein |
Protein accession | YP_485238 |
Protein GI | 86748742 |
COG category | [S] Function unknown |
COG ID | [COG3403] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCGC CGAGTTTAGA AGACGAGTTT CGCAATTTCA TTCACGCCGC CGACTTTCCA TGCGTCGGGG CGAAATCTGC GCTTTCGAAG GGAACGCTGC ATGTTCTGGT CGCGCGGGAC ATCCGGTCCA ATTGGGACGA TCGACGCATC TACGACGGCA TCACCCGCGT CGTACGCGAT TATCGGGAGA ATCGCGCGCT GTTCCAGAGC TTTGCCGTGA TCTTCGAGGG ACCTACCGAT ATCGACGAAC AAGCGTTCGA AAAATTTCTG TGGGCCCGGG CGGAAAGTCT CACCAACAAG GATACCTGGC TCGGCAGGCC TCACGACGAG CGTGTCAGCA GCGATCCGGG CGACCCGCAT TTCTCGCTCT CGTTCGGCGA GGAAGCGTTC TTCATCGTCG GTCTGCACCC GAATGCCAGC CGCCCCGCGC GTCGGTTCGA GCGGCCGGTG CTGGTGTTCA ACCTTCACGA TCAGTTCGAG CAGTTGCGCG AGATGGGGCG ATACGAACGG TTGCGCGCGA AGATCATCGA GCGCGACGTG GCTTTGGCCG GCTCGCCGAA CCCGATGCTC GCGCGACACG GCGAGACTTC GGAAGCCCGT CAGTACAGCG GTCGCGCCGT GGCCGAGCAA GAGTGGGTGT GTCCGTTCAA TCCGGTGGAC CGCGTATGA
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Protein sequence | MTPPSLEDEF RNFIHAADFP CVGAKSALSK GTLHVLVARD IRSNWDDRRI YDGITRVVRD YRENRALFQS FAVIFEGPTD IDEQAFEKFL WARAESLTNK DTWLGRPHDE RVSSDPGDPH FSLSFGEEAF FIVGLHPNAS RPARRFERPV LVFNLHDQFE QLREMGRYER LRAKIIERDV ALAGSPNPML ARHGETSEAR QYSGRAVAEQ EWVCPFNPVD RV
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