Gene RPB_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1618 
Symbol 
ID3909895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1824387 
End bp1825055 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content61% 
IMG OID637883513 
Producthypothetical protein 
Protein accessionYP_485238 
Protein GI86748742 
COG category[S] Function unknown 
COG ID[COG3403] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGC CGAGTTTAGA AGACGAGTTT CGCAATTTCA TTCACGCCGC CGACTTTCCA 
TGCGTCGGGG CGAAATCTGC GCTTTCGAAG GGAACGCTGC ATGTTCTGGT CGCGCGGGAC
ATCCGGTCCA ATTGGGACGA TCGACGCATC TACGACGGCA TCACCCGCGT CGTACGCGAT
TATCGGGAGA ATCGCGCGCT GTTCCAGAGC TTTGCCGTGA TCTTCGAGGG ACCTACCGAT
ATCGACGAAC AAGCGTTCGA AAAATTTCTG TGGGCCCGGG CGGAAAGTCT CACCAACAAG
GATACCTGGC TCGGCAGGCC TCACGACGAG CGTGTCAGCA GCGATCCGGG CGACCCGCAT
TTCTCGCTCT CGTTCGGCGA GGAAGCGTTC TTCATCGTCG GTCTGCACCC GAATGCCAGC
CGCCCCGCGC GTCGGTTCGA GCGGCCGGTG CTGGTGTTCA ACCTTCACGA TCAGTTCGAG
CAGTTGCGCG AGATGGGGCG ATACGAACGG TTGCGCGCGA AGATCATCGA GCGCGACGTG
GCTTTGGCCG GCTCGCCGAA CCCGATGCTC GCGCGACACG GCGAGACTTC GGAAGCCCGT
CAGTACAGCG GTCGCGCCGT GGCCGAGCAA GAGTGGGTGT GTCCGTTCAA TCCGGTGGAC
CGCGTATGA
 
Protein sequence
MTPPSLEDEF RNFIHAADFP CVGAKSALSK GTLHVLVARD IRSNWDDRRI YDGITRVVRD 
YRENRALFQS FAVIFEGPTD IDEQAFEKFL WARAESLTNK DTWLGRPHDE RVSSDPGDPH
FSLSFGEEAF FIVGLHPNAS RPARRFERPV LVFNLHDQFE QLREMGRYER LRAKIIERDV
ALAGSPNPML ARHGETSEAR QYSGRAVAEQ EWVCPFNPVD RV