Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1555 |
Symbol | |
ID | 3908754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1752996 |
End bp | 1753835 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637883451 |
Product | ABC transporter related |
Protein accession | YP_485176 |
Protein GI | 86748680 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGACGA ACACCGAAAT TGCTAACCGC CCCGCCGCCG CCCCCGCAGT CGCCCCCCTC CTCAGCGTCA AGAACATCGA GGTGGTCTAT GACGACGTCA TCCTGGTGCT GCGCGGCCTC AGCCTCGACG TGCCGAAAGG CGCGATCGTG GCGCTGCTCG GCGCCAACGG CGCCGGCAAG TCGACGACGC TGAAGGCGAT CTCCGGCCTG TTGAAGACCG AGGACGGCGA GGTCACCCGC GGCGAGATCC TGTTCGACGG CGAGCGGATC GACGGCACCG ATCCGGACAA GATCGTGCGC CGCGGCATCT TTCAGGTGAT GGAGGGCCGC CGCATCGTCT CCGACATGAC CTCGCTGGAA AACCTGCGGC TCGGCGCCTT CACCCGCAGC GACCGTAACG TCGCCGCCGA CATCGACATG GTCTACGACT ACTTCCCGCG GCTGAAGGAG CGTACCGGGC TCGCCGGTTA TCTGAGCGGC GGCGAGCAGC AGATGCTGGC GATCGGCCGC GCGCTGATGG CGCGGCCGAA GATGATCCTG ATGGACGAGC CGTCGATGGG CCTGTCGCCG CTGCTGGTGA AGGAAGTGTT CTCGATCATC AAGCAGATCA ACCGCGACCT CGGCGTCACC ATCCTGCTGG TGGAGCAGAA CGCCCGCGCC GCGCTGTCGG TGGCCAGCCA CGGCTACATC ATGGAACAGG GCAAGGTCGT GCTCGACGGC ACCGCCGACG AGCTGCGCGA CAACGAGGAC GTCAAGGAGT TCTACCTCGG CGGCGCCGGC GACCAGAGGA AGAGCTTCAA GAATCTGAAG AGCTTCAAGC GACGCAAGCG CTGGCTCTAG
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Protein sequence | MQTNTEIANR PAAAPAVAPL LSVKNIEVVY DDVILVLRGL SLDVPKGAIV ALLGANGAGK STTLKAISGL LKTEDGEVTR GEILFDGERI DGTDPDKIVR RGIFQVMEGR RIVSDMTSLE NLRLGAFTRS DRNVAADIDM VYDYFPRLKE RTGLAGYLSG GEQQMLAIGR ALMARPKMIL MDEPSMGLSP LLVKEVFSII KQINRDLGVT ILLVEQNARA ALSVASHGYI MEQGKVVLDG TADELRDNED VKEFYLGGAG DQRKSFKNLK SFKRRKRWL
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