Gene RPB_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1544 
Symbol 
ID3908743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1739882 
End bp1740487 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content57% 
IMG OID637883440 
ProductGeneric methyltransferase 
Protein accessionYP_485165 
Protein GI86748669 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC CTAACAGCTT GGCAATTCGC GATGGTGTCA GCAAGAGGAT CGTCGATCTC 
TTCCCCGACA AGCATGCCCG CATCGCCGAT CTCGGTTGTG GCGAAGGTGA GTTACTGGTT
CGTCTCAAGG AGTTGGGTTT CGATTCCTTG ACCGGCGTCG GCTGGAAGGT CCAGGTGCCG
CCGCAAGTCA GCAGGGTCGA AGAAATCGAC CTCAGCCAGG CCGGTTGGGC GGATCGGCTG
GGCGGCGCGA CCTTCGATGT GCTGACCGCG ACTGAGGTAC TGGAACACTT GGTCAATCCG
TACGAATTCC TCACTCAGGC GCGCCGGCTG ACAAAGCCGG GCGGCCGATT GATCTTGACG
TTTCCGAACG TGCATAATTT GCGCAGTATC ATCGGCTATG CTGTGGCCGG GCGGTTCAGC
GGGTTCTTTG GTCCAAATTG GAACACCAAC CATCCCTTGC ATGATCAGCA TATCTTTGTG
CCAAACCACG AGCTCGTCGG TTACTTCCTG AAGCTCGTCG GGTTCGAGGT TGTCTCGATC
GATTACTTGC TGGGGCGTGG AAAGCTTTTC GGGACGACTG CTCTTTTTGA TTGCAGGGCG
GTGTAG
 
Protein sequence
MNDPNSLAIR DGVSKRIVDL FPDKHARIAD LGCGEGELLV RLKELGFDSL TGVGWKVQVP 
PQVSRVEEID LSQAGWADRL GGATFDVLTA TEVLEHLVNP YEFLTQARRL TKPGGRLILT
FPNVHNLRSI IGYAVAGRFS GFFGPNWNTN HPLHDQHIFV PNHELVGYFL KLVGFEVVSI
DYLLGRGKLF GTTALFDCRA V