Gene RPB_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1527 
Symbol 
ID3908441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1720232 
End bp1721143 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content61% 
IMG OID637883423 
Producthypothetical protein 
Protein accessionYP_485148 
Protein GI86748652 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGCT CAAACTCTTC GGGCCCTCGG CAACTCGACG TCATGTCCGT CGAGCGGGCC 
GATCGTCCCC GCCATGTCGG GACGGTGCGT CGGCAGGTCG TTCGGGTGTC ATGGCTTCCG
TCCGTGGTGG TCGATCTGCT GCACGATTTC GGGACGGCAC TGCAGAAGGT CGCGAACGTC
CTGAGGTTCG AACGGTTCTG GACCGAGAAG GTCAGAAACG ACGATCGCGT CGTCGTGGTG
CCGACCTTCA ACAAGCAGCT CGGCAAGAAA CCAATCTGGA ATGCCGCGCT GAATTGGATC
AATGCGAATT CGACGTCCGG TACAATTCTC GAGTTCGGTA CCAATAATGG CGGCTGGCTG
AAATACTTCA CGGATCACCT GCCGGAGAAG TTTCACCTGG TGGGCTTCGA TTGCTTCGAG
GGACTGCCGG AGGCATGGGA CGGTCTGCCG GCGGGGTCGA TCAAGGGTTT CGGCGCTCCG
GTGGAGCTTT GGGCGGACGA TCCAGCGGCG CGCGCCAAGG TGATCGCCGA TGCCGCCGCG
GGCATTCGAT TTCCGCCGCC GCCGCAGCCG AACGTCTCGA TCGAGTCGGG CCTGTTCAGC
GAATCGCTGC CCCGCTTCCT CAGCGCCGGC TGGCCGCACG ATCTGCGTCT CGTGCACTTC
GACGCGGATC TCTACATTTC GACGCGTCCG GTTCTCGATA CGCTCTGTGG ATCGTTGAGG
CATCGTTATC TGATCCTGTT CGACGAGTTC TATTCGGTCA ATCACGAGTT CAAGGCGTGG
TACGAGTTCG TTGCGTTGTA CAAGTTGCGC GACTGGCGGG TGATCGCGAC CAGCGAGGAC
GGCTCGCAGG TTCTGATCGA GGTCAATTCC CGCTCCGCCG TCGATGTTCC GGACGTCGGC
GCCACGTCGT GA
 
Protein sequence
MDSSNSSGPR QLDVMSVERA DRPRHVGTVR RQVVRVSWLP SVVVDLLHDF GTALQKVANV 
LRFERFWTEK VRNDDRVVVV PTFNKQLGKK PIWNAALNWI NANSTSGTIL EFGTNNGGWL
KYFTDHLPEK FHLVGFDCFE GLPEAWDGLP AGSIKGFGAP VELWADDPAA RAKVIADAAA
GIRFPPPPQP NVSIESGLFS ESLPRFLSAG WPHDLRLVHF DADLYISTRP VLDTLCGSLR
HRYLILFDEF YSVNHEFKAW YEFVALYKLR DWRVIATSED GSQVLIEVNS RSAVDVPDVG
ATS