Gene RPB_1477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1477 
Symbol 
ID3908790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1666229 
End bp1667002 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content63% 
IMG OID637883372 
Productferredoxin NADP+ reductase 
Protein accessionYP_485098 
Protein GI86748602 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAT TCAACAGGGA GCGGGTGCTG TCGGTCCGGC ACTGGACCGA CACGCTGTTC 
AGCTTCAGGG CGACCCGGAA CTCGGGCTTC CGCTTCCTCA ACGGGCAATT CGCGATGATC
GGCCTCGAAG TCGATGGCCG GCCACTGCTG CGCGCTTACA GCATGGCCAG CGCCAACCAC
GAAGAGGCGC TGGAATTCTT CAGCATCAAG GTTCCGGACG GGCCGCTCAC CTCGCGATTG
CAGCAGATCA AGGAAGGCGA CACCATCCTG GTCGGACGCA AGGCGACCGG TACACTCATC
ACCGACAATC TCATTCCCGG CAAGCGCCTG TTGCTGCTGT CGACCGGCAC CGGACTGGCG
CCGTTTGCCA GCCTGATCAA GGACCCGGAG GTCTATGAGC GTTTCGAGAC CATCATTCTG
GTGCACGGCT GCCGCCAGGT TTCCGAGCTC GCCTATGGCG AAGGCTTGGT GACCTCGCTC
GGCTCGGACG AATTCTTCGG GCCGCTGATG CGCGAGCAGT TCATCTACTA CCCGACGGTG
ACCCGCGAGC CGTTCCGCAA CCGCGGCCGC ATCACCGATC TGATCGCATC GGCGCAACTG
TTCGACGACA TCGGCCTGCC GGCGCTCGAT CTCGAAACCG ACCGCATCAT GCTGTGCGGC
AGTCCGGGCA TGCTCGAAGA GCTGCGCGAT GATTTCGAAC GGGGCGGCTT CGTCGAAGGC
AGCCACAGCG CGCCCGGGCA CTTCGTCGTC GAAAAGGCCT TCGTCGAGCG CTAG
 
Protein sequence
MSAFNRERVL SVRHWTDTLF SFRATRNSGF RFLNGQFAMI GLEVDGRPLL RAYSMASANH 
EEALEFFSIK VPDGPLTSRL QQIKEGDTIL VGRKATGTLI TDNLIPGKRL LLLSTGTGLA
PFASLIKDPE VYERFETIIL VHGCRQVSEL AYGEGLVTSL GSDEFFGPLM REQFIYYPTV
TREPFRNRGR ITDLIASAQL FDDIGLPALD LETDRIMLCG SPGMLEELRD DFERGGFVEG
SHSAPGHFVV EKAFVER