| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1448 |
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| Symbol | |
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| ID | 3908398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1635128 |
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| End bp | 1635886 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637883342 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_485069 |
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| Protein GI | 86748573 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CGCCTCCCCG ATCTCCAAAG GCATCCCGGA CCGGCCACAG GCCCGCGGCA
CGGCCCGTTG CCGGGAAGCG CCCGCTGGCG GCGTCCGGTC CGACCAAGGC GCTGCTGGTG
AAGGCGCTTC CGGTCAAGGC CATGCCGCGC GCGCGCGTCG GTTCCGGCCG GCTGCCGGCG
GACGCCCAGG GGAAGATCCG GCGGCTGAAG GCGCAGCTCG CCGCGGCGCT GGCGCAGATC
GACGAATTGC GCGCCTCCGC CGAGACCGAT TTCCTGCTCG GCATCTCCAA TCGCCGCGGC
TTCGAGCGCG AACTCGCCCG CGCCCTCGCT TACATCAAGC GCTACGGCGC CGGCGGTGCG
CTGATCATGC TCGACGTCGA CCGGCTGAAG CCGGTCAACG ATACTTACGG TCACGCCGCC
GGCGACGTCG TGCTGAAAGC GGTGGTCGAC GCGCTGCTCC GCCATGTCCG CTCGTCCGAT
CTGATCGGCC GGCTCGGCGG CGACGAGTTC GCGCTGCTGC TGTGGAACCT CGGCGAGGCC
GACGCCCGGC TCAAGGCCGC GGCGCTGGAG CAGGCGGTGG ATCAACTCGC GATTCAATAC
GGCGCACACA CCGTCACCGC CGGAATCTCC GCCGGCGTGG CAATGCTGAC GGCGGACATG
GATGTGGTGG AAGCGCTCGC CGTCGCCGAC CGGGCGATGT ACGCCCGCAA GGCCGAGCGT
CACGCGCTGT CGGGGCAGCC GGAGCCGCTC AGGCGATGA
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| Protein sequence | MKKTPPRSPK ASRTGHRPAA RPVAGKRPLA ASGPTKALLV KALPVKAMPR ARVGSGRLPA
DAQGKIRRLK AQLAAALAQI DELRASAETD FLLGISNRRG FERELARALA YIKRYGAGGA
LIMLDVDRLK PVNDTYGHAA GDVVLKAVVD ALLRHVRSSD LIGRLGGDEF ALLLWNLGEA
DARLKAAALE QAVDQLAIQY GAHTVTAGIS AGVAMLTADM DVVEALAVAD RAMYARKAER
HALSGQPEPL RR
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