Gene RPB_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1402 
Symbol 
ID3908352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1593800 
End bp1594309 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content68% 
IMG OID637883296 
Producthypothetical protein 
Protein accessionYP_485023 
Protein GI86748527 
COG category[S] Function unknown 
COG ID[COG3749] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0754365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTCG TTAAGCACGG CGCGATCGTC GCCGACGACT ACGTCGCGGT CGCCGACGAC 
GCCGACCTTC CCGCGGGCGG TGCGGTGCTG GTTTCGGCGG CGCGCTTGTT CGCTGAGGCC
GAGACGCTGG CGATGCGCAA CACTCCGGTC GGCGTGGCAT GGCCCAACAA TCGCGACGTC
GCCGGGCTGG TGCCCTGGCT CGACCAGCTG TCGCTGATTG CGCTGGTGTT TCCCACCTTC
AAGGACGGCC GGGCGCACAG CCAGGGGCGT CGGCTGCGTG AAATCTATGG GTATCGCGGC
GAACTGCGCG CTACCGGGCA GGTGCTGCGC GACCAGTTCA CCTTCCTGCT GCGCAACGGC
TTCGACGCCT TCGCGGTCAC CAAGGAGTCC GATGCGCAGG CGTTCGGCGA AGCAACGCAT
CGCTACACGG AGTTCTATCA GCCGACCGGC GACGGCCACC TCAGCGCCCT GCAGCTGCGC
AAGCAGCGGC ACAAGGCGGT GGCGACATAG
 
Protein sequence
MPLVKHGAIV ADDYVAVADD ADLPAGGAVL VSAARLFAEA ETLAMRNTPV GVAWPNNRDV 
AGLVPWLDQL SLIALVFPTF KDGRAHSQGR RLREIYGYRG ELRATGQVLR DQFTFLLRNG
FDAFAVTKES DAQAFGEATH RYTEFYQPTG DGHLSALQLR KQRHKAVAT