Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1402 |
Symbol | |
ID | 3908352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1593800 |
End bp | 1594309 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637883296 |
Product | hypothetical protein |
Protein accession | YP_485023 |
Protein GI | 86748527 |
COG category | [S] Function unknown |
COG ID | [COG3749] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0754365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACTCG TTAAGCACGG CGCGATCGTC GCCGACGACT ACGTCGCGGT CGCCGACGAC GCCGACCTTC CCGCGGGCGG TGCGGTGCTG GTTTCGGCGG CGCGCTTGTT CGCTGAGGCC GAGACGCTGG CGATGCGCAA CACTCCGGTC GGCGTGGCAT GGCCCAACAA TCGCGACGTC GCCGGGCTGG TGCCCTGGCT CGACCAGCTG TCGCTGATTG CGCTGGTGTT TCCCACCTTC AAGGACGGCC GGGCGCACAG CCAGGGGCGT CGGCTGCGTG AAATCTATGG GTATCGCGGC GAACTGCGCG CTACCGGGCA GGTGCTGCGC GACCAGTTCA CCTTCCTGCT GCGCAACGGC TTCGACGCCT TCGCGGTCAC CAAGGAGTCC GATGCGCAGG CGTTCGGCGA AGCAACGCAT CGCTACACGG AGTTCTATCA GCCGACCGGC GACGGCCACC TCAGCGCCCT GCAGCTGCGC AAGCAGCGGC ACAAGGCGGT GGCGACATAG
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Protein sequence | MPLVKHGAIV ADDYVAVADD ADLPAGGAVL VSAARLFAEA ETLAMRNTPV GVAWPNNRDV AGLVPWLDQL SLIALVFPTF KDGRAHSQGR RLREIYGYRG ELRATGQVLR DQFTFLLRNG FDAFAVTKES DAQAFGEATH RYTEFYQPTG DGHLSALQLR KQRHKAVAT
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