Gene RPB_1347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1347 
Symbol 
ID3907855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1535871 
End bp1536260 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content67% 
IMG OID637883241 
ProductNADH-ubiquinone/plastoquinone oxidoreductase, chain 3 
Protein accessionYP_484968 
Protein GI86748472 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.661157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGACT CGATCTTCCC GATCAATCCG GATGCCGCGC TGGCGATCCA TGTCGCGCTC 
TCCGCGGGCA TCGTGGCGGC GATCATCGTC GTTGCCGCCT TGTTGCGCGA GAAGCGCGCC
GGCGCGCGCC CCGACGTGCC GTATGAGGGC GGCGTGCTGC CGGCCGCGCC GCAGCAGGGG
CCGATCAACG CACCATATTT CCTGATCGCT GCGCTGTTCG TCATCTTCGA CATGGAAGTC
GCGATTCTGT TCGCCTGGGC GGTCGCGGCG CGCGACACCG GCTGGTTCGG GCTGATCGAG
GCGGCGGTAT TCATCGGCGT GCTGCTGCTG GCGCTGGTCT ATCTGTGGGC CGACGGCGCG
CTCGACTGGC ACAAGGAGCG CAAGCGATGA
 
Protein sequence
MSDSIFPINP DAALAIHVAL SAGIVAAIIV VAALLREKRA GARPDVPYEG GVLPAAPQQG 
PINAPYFLIA ALFVIFDMEV AILFAWAVAA RDTGWFGLIE AAVFIGVLLL ALVYLWADGA
LDWHKERKR