| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1340 |
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| Symbol | ispH |
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| ID | 3907848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1526621 |
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| End bp | 1527586 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883234 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_484961 |
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| Protein GI | 86748465 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.495158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.45404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCCA AACCGCCTCT GAAGATCGTC CTTTGCTCGC CGCGCGGCTT CTGCGCCGGC
GTGGTGCGGG CGATCGACAC CGTGGAGCGT GCGCTGGCGC TGTACGGCGC CCCGGTCTAC
GTCCGCCACG AGATCGTCCA CAACAAATAC GTGGTCGACA GCCTGCGCGC CAAGGGCGCG
ATTTTCGTCG AGGAACTGGG CGAGATTCCG GACACCCGGG CCCCGGTAGT GTTCTCCGCC
CATGGCGTGC CGAAATCGGT TCCGGAAGAT GCGCTGCAGC GGAATTTTTT CTCGGTCGAC
GCCACCTGTC CGCTGGTCAC CAAGGTGCAT CGCGAGGCGG CGATCCATTT CAAGCGCGGC
CGCGAGATCC TGCTGATCGG GCATTCGCAT CACCCGGAAG TGGTCGGCAC GCTGGGCCAG
CTTCCCCCCG GCGCGGTGAC ACTGATCGAG ACCGCCGCCG ACGCCCAGAG CTTCACCCCG
AAGAACCCGG ACAATCTCGC TTTCGTGACC CAGACCACGC TGTCGATCGA CGACACCGCC
GGCATCGTGG CGATCCTGCG CCAGCGCTTC CCGAACATCT CCGGGCCGCA CAAGGAAGAC
ATCTGCTACG CCACCACCAA CCGCCAGGCG GCGGTGAAGA AGGTGGCGCC GGTGGTCGAT
GCGATGATCG TGGTCGGTGC GCCGAATTCG TCGAATTCGC AGCGGCTGCG CGAGGTCGCC
GAGCGCGAGG GCTGCCGGGT CTCGGTGCTG GCGCAGCGCG CCGCCGATAT CGACTGGGCG
CAATTCGAGG GCATCACCAG CCTCGGCCTC ACCGCCGGCG CCTCCGCCCC GGAGGTGATC
GTCGAGGAGA TCATGGGCGC CTTCGCCGAG CGCTTCGAGC TCAGCGTCGA GACGGTGTCC
GCGGCGGAGG AGAACGAGTT CTTCCCGCTG CCGCGCGTGC TGCGCCCGGA CGCCGCCGCC
GAATAG
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| Protein sequence | MLAKPPLKIV LCSPRGFCAG VVRAIDTVER ALALYGAPVY VRHEIVHNKY VVDSLRAKGA
IFVEELGEIP DTRAPVVFSA HGVPKSVPED ALQRNFFSVD ATCPLVTKVH REAAIHFKRG
REILLIGHSH HPEVVGTLGQ LPPGAVTLIE TAADAQSFTP KNPDNLAFVT QTTLSIDDTA
GIVAILRQRF PNISGPHKED ICYATTNRQA AVKKVAPVVD AMIVVGAPNS SNSQRLREVA
EREGCRVSVL AQRAADIDWA QFEGITSLGL TAGASAPEVI VEEIMGAFAE RFELSVETVS
AAEENEFFPL PRVLRPDAAA E
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