| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1256 |
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| Symbol | |
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| ID | 3909190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1437837 |
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| End bp | 1438526 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637883150 |
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| Product | ABC transporter related |
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| Protein accession | YP_484877 |
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| Protein GI | 86748381 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.157186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCGCTA TCAACGATCT GCACGTCGCC TACGGCCAGA GCGAGGTGCT GCACGGGCTC
AATATCGACG TCGCGCCGAA CGAGATCGTC GCGATCATGG GCCGCAACGG CATGGGCAAG
ACCACGCTGA TGAAGTCGCT GATGGGCATC ATCCCGCAGC GCAAGGGTTC GATCTCGATG
GAAGGCGCCG AGCTCGGCGG CCTCAAGAGC TACGAGCGCG TCGCCAAGGG GCTGGCTTAC
GTGCCGCAGG GCCGGATGAT CTTCTCGACC ATGACGGTGA AGGAGAACAT CGAGACCGGC
CTCGTCGTCT CCGGCGAAAA GGATGTGCCG GGCGATCTCT ACGAGCTGTT TCCGGTGCTG
CTGGAGATGA AGAGCCGCCG CGGCGGCAAT TTGTCCGGCG GTCAGCAACA GCAACTCGCG
ATCGCCCGCG CGCTCGCCAC CAGGCCGAAA GTGCTGCTGC TGGACGAGCC GACCGAGGGC
ATCCAGCCGT CCATCATCAA GGAGATGGGG CGGACGCTGA AGCGCATCCG CGACACCAAG
GGCCTGTCGA TCATCGTCTC CGAGCAGGTG CTGAGCTTCG CGCTCGACGT CGCCGACCGC
GTGCTGGTGA TCGAGAACGG CGAGATCGTC CGCGACGAGC CGCGCGCCAG CGTCGACGAG
GCGCAGGTCG CCAAATATCT GTCCGTCTGA
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| Protein sequence | MLAINDLHVA YGQSEVLHGL NIDVAPNEIV AIMGRNGMGK TTLMKSLMGI IPQRKGSISM
EGAELGGLKS YERVAKGLAY VPQGRMIFST MTVKENIETG LVVSGEKDVP GDLYELFPVL
LEMKSRRGGN LSGGQQQQLA IARALATRPK VLLLDEPTEG IQPSIIKEMG RTLKRIRDTK
GLSIIVSEQV LSFALDVADR VLVIENGEIV RDEPRASVDE AQVAKYLSV
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