Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1244 |
Symbol | |
ID | 3909178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1422634 |
End bp | 1424142 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637883138 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_484865 |
Protein GI | 86748369 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.248207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTTC ACGACTTCAC CCTGGGCGAT GTCTATCGCC GCAATGCATC GCTGTTTCCG GACCGCACGG CTTTCGTGAT CGATGGCGTC CGCGTCACCC ACCGCGACTA TCTCGCCCGG ATCGAGCGGC TGGCCGCCGG CCTGCTGCGC GACAACGTCC GGCCCGGCGA CCGTGTTGCG ATCCTGTCGC AGAACTGTCC GGAAATGGTC GAGCTGATCG GCGCGGTAGC GTTGATCGGC GCCATCCTGC TGCCGGTGAA CTATCGGCTC AACGCCGAGG AGATCGGCTT CGTGCTCGGC GACGGCGCGC CGACCGTGCT GATCGCGGGC AGTGATTACC GCGACATCAT CGCCGGGCTG CAGCCGTCGC TGGCGAGCGT GCGAAAGACC TATGCGATCG GCGCCGATCC CGGCCCGTTC GCGCCGTTCG CCGAGCTCGA GTCCGACGAT GCCTTCGTGC CACCGGAGGT CGCCGCCGCC GACGGCTTCG TCATCATCCA CACCGCCGCC GTCGGCGGCA AACCGCGCGG CGCGCTGATC TCGCAGGGCA ATCTGTTGAT CGCGCAGAGT TCGCTGATCG AGGCATGGCG GCTGACCGAG CGCGACGTCA ATCTCGGCAT GCTGCCGTTG TTTCACGTCA CCGGCCTCGG CCTGATGCTG ACGCTGCAGC AGGCCGGCGG CGCCAGCGTG ATTTCGGCGA AGTTCGATCC GGCGCAGGCG GCGCGCGACA TCGAGGCGCA CCGCGTCACG GTGCTGGCCG AGTTCGCGCC GACGCTCGGC AATATTCTCG ATCAGGCTCA GTCGGCGCAA TTGCAGAGCC TGCGCGCCGT CACCGGCCTC GATACGCCGG AGACGATCGA GCGGTTCGAG AAAGAGTGTC CGCAGGCGAC GTTCTGGGCG ACCTTCGGCC AGTCCGAGAC TTCGGGGCTG GCGACGTTTG CGCCGTATCG CGACCGGCCG AAATCCGCCG GGCGACCGTT GCCCTGGCGC ACGATCGCGG TGGTCGATGC CGACGATCGC CCGCTGCCCG CGGGTGAGGT CGGCGAGATC GTGCTGCGCG GCCCGACCGT GTTCAAAGGC TACTGGAACA ACGAGGCGGC GACCCAGCAC GCCTTCCGCA ACGGCTGGCA CCACACCGGC GACATGGGGA AGTTCGACGC CGACGGCTAT CTGTTCTACG CCGGCCGCGC GCCGGAAAAG GAACTGATCA AGACCGGCGG CGAGAACGTC TATCCGGCCG AGGTCGAAGG CGCGCTGAAG CAGCATCCGG CGATCGCCGA GGCCGTGGTG ATCGGCGTGC CCGATCCGCA ATGGAGCGAG GCCATCAAGG CGGTGTGCGT CTGCAAGCCC GGTCAAAACG TCGACGCCGT GACGCTGGCC GACTTTGTCG GCTCGCTGAT CGCGCGCTAC AAGAAGCCGA AGCACGTGGT GTTCGTCGAC GCCTTGCCCA AGGACGCCAA GGGCGCGGTC GACCGCGCCG CGGTGAAGGC CGCGCACGGA GGGGCGTAA
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Protein sequence | MALHDFTLGD VYRRNASLFP DRTAFVIDGV RVTHRDYLAR IERLAAGLLR DNVRPGDRVA ILSQNCPEMV ELIGAVALIG AILLPVNYRL NAEEIGFVLG DGAPTVLIAG SDYRDIIAGL QPSLASVRKT YAIGADPGPF APFAELESDD AFVPPEVAAA DGFVIIHTAA VGGKPRGALI SQGNLLIAQS SLIEAWRLTE RDVNLGMLPL FHVTGLGLML TLQQAGGASV ISAKFDPAQA ARDIEAHRVT VLAEFAPTLG NILDQAQSAQ LQSLRAVTGL DTPETIERFE KECPQATFWA TFGQSETSGL ATFAPYRDRP KSAGRPLPWR TIAVVDADDR PLPAGEVGEI VLRGPTVFKG YWNNEAATQH AFRNGWHHTG DMGKFDADGY LFYAGRAPEK ELIKTGGENV YPAEVEGALK QHPAIAEAVV IGVPDPQWSE AIKAVCVCKP GQNVDAVTLA DFVGSLIARY KKPKHVVFVD ALPKDAKGAV DRAAVKAAHG GA
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