Gene RPB_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1128 
Symbol 
ID3909215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1297240 
End bp1297665 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content71% 
IMG OID637883021 
ProductNUDIX hydrolase 
Protein accessionYP_484749 
Protein GI86748253 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0349929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.45534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCCGC CCACGCCGCC GCACCATCCC CAGATCGCCG TCAGCGCTTC GATTTTCCGT 
GATGGAAAGC TGTTGCTGGT CCGCCGCGCG CGCTCGCCGG CCAAGGGGTT CTACTCGTTG
CCGGGTGGTC GGGTCGAATA TGGCGAGACC CTGCACGAGG CGCTGACGCG CGAGGTCGCC
GAGGAGACCG CGCTGACGAT CGCGATCGAC GGCCTGGCCG GCTGGCGCGA CGTGGTGCCC
GGGCCCGCCA ATGCGGGGCA CTATGTGATC CTGTCGTTTG CGGCGCGCTG GATCGCCGGC
GAGCCGGTGC TGAACGACGA ACTCGACGAC GCCGTCTGGG TCGCCCCGGA GGCGGTCGGC
ACGTTCCGGA CCACCGAGGG GCTGGCCACG ATCGTCGCCA GCGCCCGCCG TCTGCTCGGA
ACCTGA
 
Protein sequence
MTPPTPPHHP QIAVSASIFR DGKLLLVRRA RSPAKGFYSL PGGRVEYGET LHEALTREVA 
EETALTIAID GLAGWRDVVP GPANAGHYVI LSFAARWIAG EPVLNDELDD AVWVAPEAVG
TFRTTEGLAT IVASARRLLG T