| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0956 |
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| Symbol | |
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| ID | 3909311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1105469 |
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| End bp | 1106341 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637882849 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_484577 |
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| Protein GI | 86748081 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACAGCG AGCCGTTGCA GGCCGAACGG CCGGGGCATC CGGGAGGGCA TGGACCGGAC
AGTCATGGAC CGGGACAGCC AGCGGTCGGC GTCGGGGCCT GTCCGTTTCA CAACGATCAA
CATCAAGCCC GTTCGGGCAA GCAGAAAACG CTGGTGTTGA CCGGCGCCTC TCGCGGCATC
GGCCACGCCA CCGGGAAGCT GTTCTCCGAT GCCGGATGGC GGATCATCAC CTGCTCGCGC
CAGCCGTTTT CGGACGATCG CTGTCCGTGG GCCACCGGCA TGGAAAACCA TGTCGCCGTC
GAACTGGCCG ATCACCGGGC ACTGCCGCGC GCGATCGATG AGCTCAAGGA AAAACTCGGC
GGCGGACCGC TCAGCGCCTT GATCAATAAC GCCGCGATCT CGCCGAAGAG CCCGGAAGGC
GAGCGCCTCA CCTCCCTGAA TACGCCGGTC GGGACCTGGA TGAGCGTGTT CCACGTCAAT
CTGCTGGCGC CGGTGATGCT GGCGCAAGGC CTGTTCGACG AATTGCGCGC CGGCAGCGGC
TCGATCGTCA ATGTCACCTC GATCGTCGGT TCGCGCGTGC ACCCGTTTGC CGGCAGCGCC
TATGCCACGT CCAAGGCGGC GCTGACCTGC CTCACCCGCG AGATGGCGCA CGACTACGCA
CCCTATGGCA TTCGCGTGAA CGCGATCGCG CCGGGTGAGA TCAAGACCGA TATCTTGTCG
CCCGAAACCG AGGCGATGCT GGCGCCGACG ATCCCGATGC GCCGTATCGG GACACCGGAG
GAAGTGGCAA AGGTGATGTT CTTTCTTTGC TCGGATGCCG CCAGCTATGT CACCGGCGAA
GAAATTCACA TCAACGGCGG CCAGCGCGTC TAG
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| Protein sequence | MHSEPLQAER PGHPGGHGPD SHGPGQPAVG VGACPFHNDQ HQARSGKQKT LVLTGASRGI
GHATGKLFSD AGWRIITCSR QPFSDDRCPW ATGMENHVAV ELADHRALPR AIDELKEKLG
GGPLSALINN AAISPKSPEG ERLTSLNTPV GTWMSVFHVN LLAPVMLAQG LFDELRAGSG
SIVNVTSIVG SRVHPFAGSA YATSKAALTC LTREMAHDYA PYGIRVNAIA PGEIKTDILS
PETEAMLAPT IPMRRIGTPE EVAKVMFFLC SDAASYVTGE EIHINGGQRV
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