Gene RPB_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0946 
Symbol 
ID3909301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1093541 
End bp1094728 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content70% 
IMG OID637882839 
ProductIron-containing alcohol dehydrogenase 
Protein accessionYP_484567 
Protein GI86748071 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGC CTTTCTCGAT CGCCCGTCTG CCCCGCATCG AATTCGGCGC AGGCGCCATC 
GCGAGGTTGC CGAGCCTCGC AGCCGTCTAC GGCAAGCGCC TGCTGCTGGT CACCGGTGCA
CGCTCGTTCG ATCATGCCTC CTATACGGCG CCGTTGCTGG CCGCGTTGCG CGACCAGAGC
TTCAGTATCG CGCGGGTGCC GATCCGCGGC GAGCCGTCGC CCGAGATGGT CGACGACGCC
GTGCGGGAGT GTCGCCGCGC CGAGATCGAC GTCGTGATCG GCCTCGGCGG CGGCAGCGCG
CTCGATGCCG CCAAGGCGAT CGCCGGGCTG CTGAAGCCCG GCAATTCGGT GATGGACCAT
CTCGAAGGCG TCGGCCCCGA ACTGCCCTAT CGAGGCCCGG CGACGCCGTT CATCGCGGTG
CCGACCACCG CCGGCACCGG CTCCGAGGCG ACCAAGAACG CGGTGTTGTC CCGTCACGGC
CCCGATGGCT TCAAGAAATC GTTCCGCGAT GAGGCGCTGG TGGCCGAGAT CGCGCTGGTC
GACCCAGAAC TGTTGGCCGG CTGCCCGCCA GCGCTGATCG CGGCCAACGG CATGGACGCG
CTGACCCAGT TGCTCGAATC CTACGTCTCG ACCCGCGCCA ATCCGTTCAC CGACGCGCTG
GCGCTGTCCG GCCTGCGCGC GGTGCGGGAC GGCCTGCTCG CCTGGTACGA TGGCGGCGAC
GCCGCGGGCG AGGCGCGCAC GCAGATGGCC TACGCCTCGC TGCTGTCCGG CATCTGTCTG
GCGCAGACCG GGCTCGGCTC TGTGCACGGT CTGGCCTCGC CGCTCGGCGC GTTCTTCCCG
ATCGGCCACG GCGTGGTGTG CGGCACGCTG GTCGCGGATG CCACTCGCGT CAATATCGCC
GCAATGGAAG CGCGTGCGCC GCAACATCCG GCGCTGGCGA AATACGCCGA GATCGGCCGC
CTGCTGTGCG GCGGCTCCGG CAGCGGCGCG GCGCAGGATC GCGACGCTCT GCTGCGCACG
CTGCGGCACT GGACGCAGCG CCTGTCGCTG CCGAGGCTGT CGTCGCTCGG CGTCGCCGCC
GCGGACGTCG ATCGGATCGT CGCGGCCAGC CGTGGGTCCA GCATGAAGAC CAATCCGGTG
GTGCTGACCG ACGACGAGAT CAGGCTGATC GTGACCTCGC GCTTCTGA
 
Protein sequence
MILPFSIARL PRIEFGAGAI ARLPSLAAVY GKRLLLVTGA RSFDHASYTA PLLAALRDQS 
FSIARVPIRG EPSPEMVDDA VRECRRAEID VVIGLGGGSA LDAAKAIAGL LKPGNSVMDH
LEGVGPELPY RGPATPFIAV PTTAGTGSEA TKNAVLSRHG PDGFKKSFRD EALVAEIALV
DPELLAGCPP ALIAANGMDA LTQLLESYVS TRANPFTDAL ALSGLRAVRD GLLAWYDGGD
AAGEARTQMA YASLLSGICL AQTGLGSVHG LASPLGAFFP IGHGVVCGTL VADATRVNIA
AMEARAPQHP ALAKYAEIGR LLCGGSGSGA AQDRDALLRT LRHWTQRLSL PRLSSLGVAA
ADVDRIVAAS RGSSMKTNPV VLTDDEIRLI VTSRF