Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0944 |
Symbol | |
ID | 3909798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1092040 |
End bp | 1092774 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637882837 |
Product | ABC transporter related |
Protein accession | YP_484565 |
Protein GI | 86748069 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCTGC TTGAAGCGCG CGGCCTGAAG AAGATCTTCG GCAAGCTCAC CGCGTTGAAT GGCGCCGAGC TGATCGTGCA GCCCAACGAG TTCCACGGCC TGATCGGTCC AAACGGCTCC GGCAAGAGCA CGATGATGAA GTGCATCGCC GGCGCCGAGG TGCCGACCGA GGGCAAAGTC ACCTTCGGCG GGCAAGACAT CACCGCGGCG ACGCCGGCCG AGCGCGCCCG CGCTGGCATG AGCCTGAAAT TCCAGATCAC CAGCGTGCTG CCGGCGTTGA CGCTCTACGA CAATGTCCTG CTGGCGCTGC AGGGCCAGAC CGCGCTGACG AAATTGATGT TCTCGCGCAC CCGCGGGCTG CTGCACGACA AGGTGATGGC GATGCTGGAG CAGTTCCGGC TGGTCGATCG CGCCGGCGAG CATGCCTCGG CGTTGTCGCA CGGCCAGCAG CAATGGTTGG AGATCGCGAT GGCGTTGGCG CCCGAACCCA AACTACTGCT GCTCGACGAG CCGACCGGCG GCATGAGCCT CGAAGAGCGC CGCGTCACCG GCGAATTGCT GGCGCCGATC AAGTCGCGCT GCTCACTGGT GATCGTCGAG CACGATCTCG ATTTCATCCG CGATATCTGC GACCGGCTCA CCGTGCTCGA TCAGGGCGCG GTGCTCAACA GCGGGACGAT CGCGGAGATT CAGAGTTGCC CCAAGGTTCA AGAGGTTTAT CTGCGCCGTG CCTGA
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Protein sequence | MALLEARGLK KIFGKLTALN GAELIVQPNE FHGLIGPNGS GKSTMMKCIA GAEVPTEGKV TFGGQDITAA TPAERARAGM SLKFQITSVL PALTLYDNVL LALQGQTALT KLMFSRTRGL LHDKVMAMLE QFRLVDRAGE HASALSHGQQ QWLEIAMALA PEPKLLLLDE PTGGMSLEER RVTGELLAPI KSRCSLVIVE HDLDFIRDIC DRLTVLDQGA VLNSGTIAEI QSCPKVQEVY LRRA
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