Gene RPB_0944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0944 
Symbol 
ID3909798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1092040 
End bp1092774 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content64% 
IMG OID637882837 
ProductABC transporter related 
Protein accessionYP_484565 
Protein GI86748069 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTGC TTGAAGCGCG CGGCCTGAAG AAGATCTTCG GCAAGCTCAC CGCGTTGAAT 
GGCGCCGAGC TGATCGTGCA GCCCAACGAG TTCCACGGCC TGATCGGTCC AAACGGCTCC
GGCAAGAGCA CGATGATGAA GTGCATCGCC GGCGCCGAGG TGCCGACCGA GGGCAAAGTC
ACCTTCGGCG GGCAAGACAT CACCGCGGCG ACGCCGGCCG AGCGCGCCCG CGCTGGCATG
AGCCTGAAAT TCCAGATCAC CAGCGTGCTG CCGGCGTTGA CGCTCTACGA CAATGTCCTG
CTGGCGCTGC AGGGCCAGAC CGCGCTGACG AAATTGATGT TCTCGCGCAC CCGCGGGCTG
CTGCACGACA AGGTGATGGC GATGCTGGAG CAGTTCCGGC TGGTCGATCG CGCCGGCGAG
CATGCCTCGG CGTTGTCGCA CGGCCAGCAG CAATGGTTGG AGATCGCGAT GGCGTTGGCG
CCCGAACCCA AACTACTGCT GCTCGACGAG CCGACCGGCG GCATGAGCCT CGAAGAGCGC
CGCGTCACCG GCGAATTGCT GGCGCCGATC AAGTCGCGCT GCTCACTGGT GATCGTCGAG
CACGATCTCG ATTTCATCCG CGATATCTGC GACCGGCTCA CCGTGCTCGA TCAGGGCGCG
GTGCTCAACA GCGGGACGAT CGCGGAGATT CAGAGTTGCC CCAAGGTTCA AGAGGTTTAT
CTGCGCCGTG CCTGA
 
Protein sequence
MALLEARGLK KIFGKLTALN GAELIVQPNE FHGLIGPNGS GKSTMMKCIA GAEVPTEGKV 
TFGGQDITAA TPAERARAGM SLKFQITSVL PALTLYDNVL LALQGQTALT KLMFSRTRGL
LHDKVMAMLE QFRLVDRAGE HASALSHGQQ QWLEIAMALA PEPKLLLLDE PTGGMSLEER
RVTGELLAPI KSRCSLVIVE HDLDFIRDIC DRLTVLDQGA VLNSGTIAEI QSCPKVQEVY
LRRA