| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0908 |
|---|
| Symbol | |
|---|
| ID | 3909761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 1045512 |
|---|
| End bp | 1046168 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637882801 |
|---|
| Product | maleylacetoacetate isomerase |
|---|
| Protein accession | YP_484530 |
|---|
| Protein GI | 86748034 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | [TIGR01262] maleylacetoacetate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.925505 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGA CCGCTGATCA CGACGCCGCG GTGCTGTACG GTTACTTCCG GTCCTCCGCG
GCCTATCGGG TGCGCATCGC GCTCAATCTG AAGGGCGTCG TCGTCGCGCA GCGCTACGTG
CATCTGCGCG ACGGCGAGCA GAATCTCGAA GCCTACCGCT GGATCAATCC CGCCGGATCG
GTGCCGTTTT GGCGCGAGGG CGATTTCGAT CTCGCGCAAT CGCTGGCGAT CATCGAATAT
CTCGACGAGA CCCATCCCGA GCCGCCGCTG CTGCCGAGAG ATCCCAGGGC CCGTGCGATC
GTCCGCGAAA TGGCCTACGC GGTCGCCTGC GACATCCATC CGCTCGGCAA TCTGCGGATT
CTGAAACGGC TGACCGAGCT CGGCATCGAC GAGATCGAGC GCGCGCGCTG GTCGAAGCAA
TGGATCGAGC AGGGTTTTGT GGCGATCGAG GCGCGGCTTT CGCAGACGCC GGGGCCGTTT
GCTTATGGAG ATCAGCCGAC GCTGGCCGAT CTGTGCATCG TGCCGCAGGT CTTCAACGCC
CGTCGCTTCG ACGCCGACCT CGCCCCGTTC GAACGCATCC GCCAGATCGA AGCCGAAGCG
ATGAAACTCG ACGCCTTCGT CGCCGCCGAG CCGGGCCGGC AGCCGGATGC GGAGTGA
|
|---|
| Protein sequence | MTKTADHDAA VLYGYFRSSA AYRVRIALNL KGVVVAQRYV HLRDGEQNLE AYRWINPAGS
VPFWREGDFD LAQSLAIIEY LDETHPEPPL LPRDPRARAI VREMAYAVAC DIHPLGNLRI
LKRLTELGID EIERARWSKQ WIEQGFVAIE ARLSQTPGPF AYGDQPTLAD LCIVPQVFNA
RRFDADLAPF ERIRQIEAEA MKLDAFVAAE PGRQPDAE
|
|---|
| |