Gene RPB_0826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0826 
Symbol 
ID3909641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp940267 
End bp940935 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content69% 
IMG OID637882719 
Productthioredoxin-like protein 
Protein accessionYP_484448 
Protein GI86747952 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA CCCCGCCCGA CCTCACCCCG CCGCGCCGCG CCGGCCGCCG CACCATCATT 
CTGGCCGCGA TCGCCGTGCT CGTGGTCGCC GGAGCAGCGG GGGTATACGG GATCGGCGGG
CTGCAGCGCA ATGCATCGGG CGATCCGACC TGCCGGCCGG CGGTGGCGCT GGCGCAGCAG
CTCAAGCCGC TGGCGCGCGG GGAAGTTGCG GCGGTGACGA TGGCCTCGGC ACCGCTGAAG
CTGCCCGACC TGATTTTCCA GGACGGCGCC GGCCAGCCGA AGAAATTGTC CGACTTCCGC
GGCAAGACCC TGCTGGTGAA CCTGTGGGCG ACCTGGTGCG TGCCCTGCCG CAAGGAAATG
CCCGCGCTCG ACAATCTGCA GGCGAAGCTC GGCAGCCCGC AGTTCGAGGT GGTGGCGATC
AACATCGACA CCCGCGACCC GGCCAAGCCT AAGAAGTTTC TCGACGACGA GAAGCTGACC
CGGCTGAACT ACTTCACCGA CGCCTCGGCC CGGGTGTTCC AGGACCTCAA GAGCGTCGGC
CGCGCGCTGG GGATGCCGAC CTCGGTGCTG GTCGATGGTC AGGGCTGCGA GATCGCCACC
ATCGCCGGCC CCGCCGAATG GGACAGTGCC GACGCGCTGG CGCTGGTCAA GGGCGCGCTG
CCAAAATAG
 
Protein sequence
MTETPPDLTP PRRAGRRTII LAAIAVLVVA GAAGVYGIGG LQRNASGDPT CRPAVALAQQ 
LKPLARGEVA AVTMASAPLK LPDLIFQDGA GQPKKLSDFR GKTLLVNLWA TWCVPCRKEM
PALDNLQAKL GSPQFEVVAI NIDTRDPAKP KKFLDDEKLT RLNYFTDASA RVFQDLKSVG
RALGMPTSVL VDGQGCEIAT IAGPAEWDSA DALALVKGAL PK