Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0695 |
Symbol | |
ID | 3908201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 782052 |
End bp | 782810 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637882587 |
Product | ABC transporter related |
Protein accession | YP_484317 |
Protein GI | 86747821 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.321828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATA TCCTGCTGGA TGCCCGCGAC ATCTCCGTCA CCTACGGCAA GGTCGAAGCC GTCAGAGGCG TCGCAGTTCA GGTGACGCGT GGCCAGATCG TAACCGTCAT CGGACCGAAC GGCGCGGGCA AGAGCAGCCT GCTGAATGCG CTCATGGGCG TCGTGCCGTG TTCCGGCCGG ATCGTTTTCG GGGATGCGGA AATTGCGCGC CTCGCGGTGG AAGACCGTGT GGCGCAAGGC GTTTGCCTCG TTCCGGAAAG CCGGGAGTTG TTCGCCGACA TGACGGTGCT GGATAATCTC GTCCTGGGCA CCTATTCGCG GTTTCGCAAA GGCGAACGGA ATTTCAAGGC CGACATCGAA ACCGTCTATG AGCTGTTTCC CCGGCTCGGC GAGCGGCGGG CGCAGCGTGC AGGGACGCTG TCGGGCGGCG AACGCCAGAT GCTCGCGATC GGGCGGGCGC TGATGGCGCG TCCGAACCTG CTGATGCTGG ACGAGCCGTC CTTGGGGTTG GCGCCACTGA TCGTCCGCGA GATCCTTCGG GTCGTCGTCT CGCTTCGCGA GCGCGGCGTC GCGCTCCTCG TCGTCGAGCA GAATGCAAAG GCCGCCCTTC AGATCGCCGA CTATGGCTAC GTGATCGAAG GCGGCCGGGT GGTCATGGAA GGCGCCGCGG CTGAATTGCA GGGCAATGCA CGCGTCGTCG CCACCTATCT CGGTGCCGCC AGCGGCAAGG CGCCGAGCGC CGCGGAAGGA TCAGCATGA
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Protein sequence | MTDILLDARD ISVTYGKVEA VRGVAVQVTR GQIVTVIGPN GAGKSSLLNA LMGVVPCSGR IVFGDAEIAR LAVEDRVAQG VCLVPESREL FADMTVLDNL VLGTYSRFRK GERNFKADIE TVYELFPRLG ERRAQRAGTL SGGERQMLAI GRALMARPNL LMLDEPSLGL APLIVREILR VVVSLRERGV ALLVVEQNAK AALQIADYGY VIEGGRVVME GAAAELQGNA RVVATYLGAA SGKAPSAAEG SA
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