Gene RPB_0672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0672 
Symbol 
ID3908599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp756443 
End bp757672 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content69% 
IMG OID637882563 
Producthypothetical protein 
Protein accessionYP_484294 
Protein GI86747798 
COG category[S] Function unknown 
COG ID[COG1322] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.818554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGA TTCTGTTCGA TCCGGGAGGC GCCCCGGTCA GCGTCGGCAT GGCGCTGGTC 
GGCGCCAGTG CACTGGCGCT GCTGTTGCTG CTGGCTATCG TGCTGGTGAT CGCGCGCGGG
CTGCAGGGCG GCAACGCCGC GGCGCTGGCG CAGGCCCGCC GCGCCGCCGA CCTCGAGCAG
CGGCTGTCGG ACCTGATCCG GTTCCAGAGC GAGGCCAATG GCCGGGTCGA TGCGATGGGC
CGGGCGCTGG CGGGGCGGCA GGCCGAGATG GCCCGCGCGG TCAGCGAGCG GCTGGATACG
GTGACCCACC GCTTCGGCCA GTCGATGACC CAGTCGACGC GGCACACCAT GGAGAGCCTG
CAGGCGCTGC ACGAGCGGCT CGGCATCATC GACCGCGCGC ACGAGAATCT CACCGAACTG
ACCGACCAGG TGACGACGCT GCGCGACGTG CTGGCCAACA AGCAGGCGCG CGGCGCCTTC
GGCCAGGCGC GGATGGAATC GATCGTGCAG GACGGCCTGC CGAAAGGCGG CTACGCGTTC
CAATACACGC TGTCGACCGG CAAGCGGCCG GACTGCGTGG TGCTGCTGCC CGACCAGCGG
CCACTGTGCA TCGACGCCAA GTTTCCGCTC GAGGCGGTGA CGGCGCTGCG CGAGGCCCGC
AGCGACGAGC AGAAGAAAGC CGCATCGCAG CGGCTGCGGA TCGACGTGAT GCGGCATGTC
GGCGACATCG CCGAGAAATA CCTGATCCCC GGCGAGACCC AGGACACCGC GCTGATGTTC
GTGCCGTCGG AATCGGTCTA TGCGGAGATC CACGACGGCT TCGACGACGT CATCCAGAAG
GCCTATCGGG CGCGAATCGT GCTGGTGTCG CCGTCGCTGC TGATGCTGGC GATCCAAGTG
ATGCAGCAGA TCCTGAAAGA CGCGCGGATG CGCGATGCCG CCGACCAGAT CCGCACCGAA
GTGCTGAGCC TCGGCGACGA TCTCGCGCGC CTGCGCGAGC GCGTCACCAA GCTGCAGACG
CATTTCGGCC AGGTCAACGA CGACGTCCGC CAGATTCTCG TCTCGGCCGA TAAGATCGAG
CGCCGCGCCG CGCGGATCGA GGAACTGGAT TTCGCCGCGC CCGCCGCAGC GGCGCCGGCA
CCGACATCGG CCGACGAGGC GCCGCTCGCG CCGGACCGCG ATCTGTTCGC CTCGCGCGCC
TTCAAAATCG ACGAGGTCGC GTCGGGCTGA
 
Protein sequence
MNEILFDPGG APVSVGMALV GASALALLLL LAIVLVIARG LQGGNAAALA QARRAADLEQ 
RLSDLIRFQS EANGRVDAMG RALAGRQAEM ARAVSERLDT VTHRFGQSMT QSTRHTMESL
QALHERLGII DRAHENLTEL TDQVTTLRDV LANKQARGAF GQARMESIVQ DGLPKGGYAF
QYTLSTGKRP DCVVLLPDQR PLCIDAKFPL EAVTALREAR SDEQKKAASQ RLRIDVMRHV
GDIAEKYLIP GETQDTALMF VPSESVYAEI HDGFDDVIQK AYRARIVLVS PSLLMLAIQV
MQQILKDARM RDAADQIRTE VLSLGDDLAR LRERVTKLQT HFGQVNDDVR QILVSADKIE
RRAARIEELD FAAPAAAAPA PTSADEAPLA PDRDLFASRA FKIDEVASG