| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0624 |
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| Symbol | |
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| ID | 3908317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 703696 |
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| End bp | 706209 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637882513 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_484246 |
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| Protein GI | 86747750 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0348163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.542065 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACG TATTGGGGTC GATGCGTCGG ACCTGCTTGT CGTGCACGTC GCTGGTGCGC
GGCCTCGCGG GCGCTGGCCT GGTCACGGCA TCGTCGCCGG CTTTCGCGGC TGACGATCCG
CTCGCCGCGC TGACCTCCTG GATCATCGTC GATCTCAACC GCCACGAGCT GGTGACGCTG
GCGATGGCGG TGTCGGTGCT CGGCTTCTCG GTGATGTCGG CGATCCTGCT GATGCGCACG
CGGCAGCGCG CCGCCGCGCA GGAGGCGCGG TTGCGCGCCG AGGTGCAGAC GCTGCAGGCC
GAGTCCGATC GCTTCCGCGC CTTGCTGTTC GCCGAGCCGC AAGTGCTGAT CTCGTGGTCC
GCCGGCGACG ACCGTCCGCA GATCAGCGGC GACATCGCGC TGCTGCTGCC GAACGACGCC
CATGGCGGAC AGCCGCAACG CGTGCTCGCG TTCGGAACCT GGCTGCCGCC CGAGCCGGCG
CTGCAGATCG ATCACGCCGT CGACGCGCTG CTCGACAAGG GCGAAGCCTT CCTGCTGCAT
CTGACGACGT CGACCGGACG CGCGATCGAA GCGATGGGCC GCGCCGTCGG CGGCCAGGCG
ATCCTGCGGA TTCGCGAACT CTCGGGCGTC CGTCGCGAAC TCGCCGACAT GTCGCGCCGC
TTCAAGATGC TGCAGGATGA AACCGACATG CTGCGCGGCT TCGCCGATGC CGCACCCTGG
CCGATCTGGA CCCGGCGCGC CTCGGGCGAA CTCAACTTCG CCAATGCCGC CTATGCGCGG
GCGGCCGATG CGAGCAGCCC GGCGGATGCG GTCGGCCGCA ATCTCGAACT GCTCGACAGC
ACCGATCGCG GCAATCTCGC GCGGGCGCTC GCCGAGGATT CCGAATTCGC CGCGCGGCTG
CCGATCGTGG TCGCCGGCGA GCGTCGTTAC TTCGACGTCC GCGCGTTGCG GCTGAAGGGC
GGCAGCGCCG GCATGGCGGT GGATTCCAGC GAGGCGGCGG CGCTCGGCGC GGCGCTGGTG
CGGATGGCGG AGGCGCATCG CCGCACGCTC GATCAATTGT CGTCCGGCGT CGCGGTGTTC
GACGCGCAGC GAAGGCTCGC CTTCTACAAC GATTCCTATC GCAAGCTGTG GGACCTCGAC
CGCACCTTCC TCGACAGCCA TCCGGACGAT TCGAGCGTGC TCGACCGGCT CCGCGCCGCG
CGCAAGCTGC CGGAGGAACG CGACTTCCGG GAGTGGAAGA ACAGGCTGCA CGAGGCCTAT
CGGGCGGTCG AGGCCGACAA GGCGATCTGG TATCTGCCCG ACGGCCGGGC CATCAGCATC
GTCACCACGC CCAATCAGGA AGGCGGCGTC ACCTATCTGT TCGACGACGT CACCGAAAGC
CTCGATCTGC AGCGCCGCTA CGGCGGGCTG ATCGACGTCC AGCGCGAGAC CCTCGACAAT
CTCAGCGAAG CGGTCGCGGT GTTCGGCAGC AACGGCTGCG CGCAACTGTT CAACCCGGCG
TTCACGCGGA TGTGGAACCT GTCGCCGGAA GCGCTCAACG ACCGGCCGCA CATCGAAACC
GTCGAGGCCT GGTGCCGGCC GCTCTACGAC GACGACGCGA GCTGGCAGGC GCTGCGCGGC
GCCATCACCG GGATCGACGA CCGCAAACAG GTGGCGCTGA AGCTCGAGCG AAAGGACGGC
ACCGTGCTGT CCTGCAAGAC CATGCCGCTG CCCGACGGCG CCACGATGCT GACGTTCCAG
GACATCAGTG ACACCGAGAA TGTCGAGCGC GCCTTGCGCG AGCGTAACGA GGCGCTGGAG
ACCGCCGATC GCATCAAGAT CGACTTCGTC CACCACGTCT CCTACGAGCT GCGCTCGCCG
CTGACCACGA TCATCGGCTT CGCGCATCTG CTCGGCGACC CGAGCACCGG CCCGCTCAAC
GACAAGCAGT CGGAATACAT CGCCTACATC ACCTCGTCGA CCAACGCGCT GCTGGCGATC
ATCAACAACA TCCTCGATCT CGCCAGCATC GACGCCGGCG CGATGACGCT CAATCTCGGG
CCGATCGAGA TCCGCCGCAC CATCGCGGCG GCGGCGGAGG GCATTCAGGA CCGCCTCGCG
CGCGACCAGA TCACGCTCGA CATCGACACC GATCCGGCGA TCGGCGAGTT CGTCGGCGAC
GAGCGCCGGG TCGTGCAGGT GCTGTACAAT CTGCTCGCCA ACGCCATCGG CTTCTCGCCC
AACGAGGCGA CCGTGAAGCT GGTCGTCCGC AAGAAGGGGA CGAACGTGGT GTTCACCGTG
ACCGATGCGG GTCCGGGCAT CGCGCCGGCG CTGAAGGACA AGGTGTTCGA TCTGTTCGAG
AGCGATTCCC AAGGCTCGCG GCATCGCGGC CCGGGGCTCG GCCTGGCGCT GGTGCGCTCC
TTCGTCGAGC TGCACGGCGG CAAGGTCGAG GTCGATTCGG TGGTCGGGCA CGGCACCTCG
GTGATCTGCG AATTCCCGAT CGAGCCGGGC GCGCAGCGCA ACGCCGCCGA ATGA
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| Protein sequence | MSDVLGSMRR TCLSCTSLVR GLAGAGLVTA SSPAFAADDP LAALTSWIIV DLNRHELVTL
AMAVSVLGFS VMSAILLMRT RQRAAAQEAR LRAEVQTLQA ESDRFRALLF AEPQVLISWS
AGDDRPQISG DIALLLPNDA HGGQPQRVLA FGTWLPPEPA LQIDHAVDAL LDKGEAFLLH
LTTSTGRAIE AMGRAVGGQA ILRIRELSGV RRELADMSRR FKMLQDETDM LRGFADAAPW
PIWTRRASGE LNFANAAYAR AADASSPADA VGRNLELLDS TDRGNLARAL AEDSEFAARL
PIVVAGERRY FDVRALRLKG GSAGMAVDSS EAAALGAALV RMAEAHRRTL DQLSSGVAVF
DAQRRLAFYN DSYRKLWDLD RTFLDSHPDD SSVLDRLRAA RKLPEERDFR EWKNRLHEAY
RAVEADKAIW YLPDGRAISI VTTPNQEGGV TYLFDDVTES LDLQRRYGGL IDVQRETLDN
LSEAVAVFGS NGCAQLFNPA FTRMWNLSPE ALNDRPHIET VEAWCRPLYD DDASWQALRG
AITGIDDRKQ VALKLERKDG TVLSCKTMPL PDGATMLTFQ DISDTENVER ALRERNEALE
TADRIKIDFV HHVSYELRSP LTTIIGFAHL LGDPSTGPLN DKQSEYIAYI TSSTNALLAI
INNILDLASI DAGAMTLNLG PIEIRRTIAA AAEGIQDRLA RDQITLDIDT DPAIGEFVGD
ERRVVQVLYN LLANAIGFSP NEATVKLVVR KKGTNVVFTV TDAGPGIAPA LKDKVFDLFE
SDSQGSRHRG PGLGLALVRS FVELHGGKVE VDSVVGHGTS VICEFPIEPG AQRNAAE
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