Gene RPB_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0547 
Symbol 
ID3909586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp614643 
End bp615533 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content68% 
IMG OID637882435 
Producthypothetical protein 
Protein accessionYP_484169 
Protein GI86747673 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0653377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATTC CCGTCAGCTT CGCAACTCGT CGGACGGCCA TCGCGGCGCT GCTGCGGTCC 
CGCTGGTCGG CAGGTGTTCT GGCTGCCGTG CTGGCGAGCG GGCTGGCGGC CGCGAGCCCG
GCCGCGGCCC AGGGCAAGCT CGACGCCCGC TATGAAGCCA CGCTGGCGGG GATCGAGGTC
GGCAAGGGCG CCTGGGTGAT CGAGGTCACC GACGATGGCT ACGCCGCCGC CGCCAATGGC
GCGACGTCGG GCGTGATGCA GGCGTTTTCG CGCGGCCATG GCAGCGGCGA AGCGCAGGGG
CGCATCGTCA ACGGCCAGTT CGCGCCGATG AACTACATGG CGATCACCGC CAGCGCCAAG
AAGATCGAGA CCATCCGGAT CACGCTGGCG AACGGCAACG TCAAGGAGTC CTCGATCGAG
CCGGAGCAGC CGCCGGATGC CGATCGGATT CCGGTCACCG ATGCGCACCG CCGCGGCGTG
GTCGATCCGA TGACCGGCTC GTTCCTCCGC GTGCCCGGCA CCGGCGACCT GATGAGCCCG
GAGTCGTGCC GGGTCTCGAC GCCGATCTTC GACGGCCGGA TGCGCTACGA TCTGCGGCTG
GACTACAAGC GCACCGAAAT GGTCAAGGCC GAGAAGGGCT ATCAGGGCCC GGTGCTGGTC
TGCGGCGTCT ACTTCACGCC CGTGTCCGGT TACATCCCCG ATCGCGCTGC GATCAAATAT
CTGACGGAGC AGCGCAACAT GGAGGTCTGG CTGGCGCCGA TCGCCGGGAC GCGGGTGCTG
GTGCCGTTCC GGATGAAGAT TCCGACCCCG CTCGGCAATG CCGTGCTGCA GGCGACCCAG
TTCGTCACCA CCGCGACCCC GCCGAAATCC GCCGCGTCGC GGACCCAATA G
 
Protein sequence
MNIPVSFATR RTAIAALLRS RWSAGVLAAV LASGLAAASP AAAQGKLDAR YEATLAGIEV 
GKGAWVIEVT DDGYAAAANG ATSGVMQAFS RGHGSGEAQG RIVNGQFAPM NYMAITASAK
KIETIRITLA NGNVKESSIE PEQPPDADRI PVTDAHRRGV VDPMTGSFLR VPGTGDLMSP
ESCRVSTPIF DGRMRYDLRL DYKRTEMVKA EKGYQGPVLV CGVYFTPVSG YIPDRAAIKY
LTEQRNMEVW LAPIAGTRVL VPFRMKIPTP LGNAVLQATQ FVTTATPPKS AASRTQ