| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0492 |
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| Symbol | |
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| ID | 3909837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 551346 |
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| End bp | 552071 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637882379 |
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| Product | LrgB-like protein |
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| Protein accession | YP_484114 |
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| Protein GI | 86747618 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG CCGACCCGTT CGCGCTGTGG GTCTATCTCT CGCAGACGCC GCTGCTGTGG
CTGACGGTGA CGCTGCTGGT CTACGCCGCC ACCGACGCCA TGTCGCAGGC CACCGGGCGC
AATCCGCTGA TGAACCCGGT GCTGCACGCG ATGTGGATCA TCGGCGCCTT CCTGTGGCTG
ACCGGCACCT CCTACACGAC CTATTTCAGC GGCGCGCAGT TCGTACATTT TCTGCTCGGC
CCGGCGACCG TGGCGCTGGC GGTGCCGCTC TACGAGAACC GCCATCGTGT CGTCGCCGCG
ATCCTGCCGA TGGCGATCGC GCTGGTGGTC GGCTGCGTCG CCGCAATCGT CTCGGTGGTG
GTGCTGGCGC AGCTCGCGGG TCTGCCCGAG CCGGTGGTGC TGTCGCTGGC GCCGAAATCG
GTCACCGCCG GCGTCGCGAT GGGTATCAGC GAATCGCTGC GCGCCGATCC GTCGCTGACC
GCCGTCGCCG TGATCCTCAC CGGCATCATG GGGGCGATCG TGGTGACGCC GCTGATGAAC
GCGCTCGGCA TCCGCGACTT CCGCGCCCGC GGCTTCGCGG TCGGGCTGGC ATCGCACGGC
ATCGGCACCG CCCGCGCCTT CCAGGTCGAC GCCATCGCCG GCGTGTTCGC CGGCATCGCC
ATGAGCCTGA ACGCGCTGAT CACCGCCCTG CTGGTGCCGG TGCTGGTCAC GCTGCTGGTG
AGGTAG
|
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| Protein sequence | MSAADPFALW VYLSQTPLLW LTVTLLVYAA TDAMSQATGR NPLMNPVLHA MWIIGAFLWL
TGTSYTTYFS GAQFVHFLLG PATVALAVPL YENRHRVVAA ILPMAIALVV GCVAAIVSVV
VLAQLAGLPE PVVLSLAPKS VTAGVAMGIS ESLRADPSLT AVAVILTGIM GAIVVTPLMN
ALGIRDFRAR GFAVGLASHG IGTARAFQVD AIAGVFAGIA MSLNALITAL LVPVLVTLLV
R
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