Gene RPB_0473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0473 
SymbolaceK 
ID3909818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp521031 
End bp522848 
Gene Length1818 bp 
Protein Length605 aa 
Translation table11 
GC content68% 
IMG OID637882360 
Productbifunctional isocitrate dehydrogenase kinase/phosphatase protein 
Protein accessionYP_484095 
Protein GI86747599 
COG category[T] Signal transduction mechanisms 
COG ID[COG4579] Isocitrate dehydrogenase kinase/phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCA CCCGTCATCC CTTTGCCTCC GACATCGACG CCGCCACCCG GATCGCCGAG 
CCGGATTTCG ATCTGCTCGA CGCGCTGGTG CGGACCGACG ATCCGGACGA CCAGGCCCAC
ACGCTGGCGC GCGTGGTGTT GGCGGCGTTC GACAATTATT ACGCGGTGTC GCGGCGGATT
CCGGCGCTGG CGCAGGCGGC GTTCGAGGCG CGCGACTGGG CCGCCACGGT GCGGCTGTCG
AAAATCCGGC TCGGGCTGTA CACCGCCTGC ATCGATCAGC TGGTGCCGCT GCTGAAGGCC
GGGCTGCCCG AGCTCGCCAA TGACGAACAG CTCTGGGCGC GCGCCGAGGC CGAGCTGCTG
GCGGCGATCG CCGAGCGCTA CGAGGCCGAT TTCGCCTTCG CGTTCTGGCA GTCGCTGCGC
CGCAAGCTGG TCAGCGACGA ATGGCGGCCG GTGTCCTACG ATACCGGGCC GGCGGCGCGG
CCGAAGGCGA CCAGCGCTGC GATCCTCAAG ACCATCGCCA CGACGCTGCC GATCAGGCCG
GCGGTGATCC GCGACATCCT CGACGGCGCC GGCCTCCGCG GGCCGTGGCG CGATCGCGAC
GGCGACGCCG CGCTCGCCGC GGCCGCGATC GAGGCTGCGC TGGAGCCGCT CGGCCCGCGC
GCCGGCGAGA CCGCGAAGAT CGAGATCGCC GAGTCCGGCT TCTTCCGCAA TCGCGGCGCC
TGCCTGGTCG GGCGCGTCCG GCTGCGCGAC CGCGGCGACA TGCCGATGCG CAACCTGCCG
CTGTTGATCG CGCTGCTCAA CGAGGACGAC GGCCTCGTCG TCGATGCGGT GCTGTGCGAC
GCCGACGAGC TGCAATACGC GTTCTCCTCG ACGCTGGCCA ATTACCACGC CACCAATCCG
CATTATCACG AGCTGGCGCG GCTGTTGCAC GAACTGATGC CGAAGCGGCC GCTCGGCACG
CAATATTCCT GCATCGGCTT CCACCACCTC GGCAAGGTCG CGGTGATGAC CGAGATTCTC
GCCGAGCACC GCAGGAGCAA GGAGAAGCTC GACACCGCGC CGGGTTTCAA GGGCACGGTG
GCGATCGCGT TCACGATGCC GTCCTCGGCC TATGTGCTGA AGATCATCCG CGACCATCCC
ACCGACGACT ACAAGTTCGA CTATTTCGAC GGCCTCGACG CGGTGCTGCG CAAATACAAT
CTGGTGCACG AGATCGATCG CGCCGGCTCG ATGCTCGACA ACATCATCTA CTCCAACGTC
AAGCTCGAGC GCACGATGTT CGCGCCCGAT CTGCTCGACG AGCTGCTGGA ATCCGGCATC
GACACCGTGA CGCTGGAACG CGGCGCGCTG GTGTTCCGGC ATCTGATCGT GCAGATCAAG
CTGACGCCGC TGCCGCTCTA TCTCACCACC GCGTCCGCCG CCGATGCCCG CGCCGCGGTG
ATCAATCTCG GCGACTGCAT CAAGAACAAC GCCGCCGCCG ATATCTTCAA CAAGGACCTC
GACGGCCGCA ACTACGGCGT CAGCCGCATC CGCAAAGTGT ATCTGTTCGA CTACGACGCG
GTCGAGCCCC TGACCGACGT CCGGGTCCGC GGCGACGACG CGCCGCCGGG GCCGGAGTTC
GAGGACGGCG TGGTGTTCCG CCCGGCCGAC ATGCTCGGCG GGTTGCGGAT CGACGACCCG
GCGCTGCGCC GCGCCTTCCG CGACGCCCAT CCCGAGCTGA TGCAGCCGGA GTATTGGCAG
GGCATGCAGC GCGCGCTGCG CGCCGGCAAG GTTCCCCGCG TGATGAACTA TCCGGCGGCC
CGGCGGCTGC GGCGTTAG
 
Protein sequence
MTATRHPFAS DIDAATRIAE PDFDLLDALV RTDDPDDQAH TLARVVLAAF DNYYAVSRRI 
PALAQAAFEA RDWAATVRLS KIRLGLYTAC IDQLVPLLKA GLPELANDEQ LWARAEAELL
AAIAERYEAD FAFAFWQSLR RKLVSDEWRP VSYDTGPAAR PKATSAAILK TIATTLPIRP
AVIRDILDGA GLRGPWRDRD GDAALAAAAI EAALEPLGPR AGETAKIEIA ESGFFRNRGA
CLVGRVRLRD RGDMPMRNLP LLIALLNEDD GLVVDAVLCD ADELQYAFSS TLANYHATNP
HYHELARLLH ELMPKRPLGT QYSCIGFHHL GKVAVMTEIL AEHRRSKEKL DTAPGFKGTV
AIAFTMPSSA YVLKIIRDHP TDDYKFDYFD GLDAVLRKYN LVHEIDRAGS MLDNIIYSNV
KLERTMFAPD LLDELLESGI DTVTLERGAL VFRHLIVQIK LTPLPLYLTT ASAADARAAV
INLGDCIKNN AAADIFNKDL DGRNYGVSRI RKVYLFDYDA VEPLTDVRVR GDDAPPGPEF
EDGVVFRPAD MLGGLRIDDP ALRRAFRDAH PELMQPEYWQ GMQRALRAGK VPRVMNYPAA
RRLRR