Gene RPB_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0299 
Symbol 
ID3907928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp339146 
End bp340231 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content70% 
IMG OID637882183 
Producthypothetical protein 
Protein accessionYP_483921 
Protein GI86747425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0840427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCCG AAGGCAAGTC CTATCCGTTC GATCATCTGC CGGCGATCGA TTACGACGCC 
CATCCGGCCT ATGGCCGCGT GATGTCGATG CCGATGCTCG GCGCAAGGCT GAAGGCGATC
AGCTATTTCA GCTATGGGTT CCTGCTGGCC TCGGCGCAGC GCCTGATCGA CATCGAGCAC
CTGCCGCGCC CGGCCGAGGC TGGAAAAACC TTCGTCGCGG TGCTGCGCAA CCTGCCGACC
ACGCTGCGCC AGATCCTGCT GCAACGACTG GCGCGCGTCA CCGCCGGCCA GGCCTATGCG
CCGAAGACCG AGCGCGGCAC CGCCGTGTTC GTGCCGCTGC AGGGCGACGG CTTCGCCGTC
ACCCGCCTCG GCGCCGATGC GATCGCGCAG ATCCGCACCC AGCTCGCCCC GCAACTGACG
ACGCTGGAGC AGCGCGCCAC TCCGGCCGGC GATCCCGCGA GCAGCCGGAT GGCGATCGAT
CCGGCAGTGG CGCCTGATCT CTATCGCTGG TTCAATCAGA CCGCGGCCGA TCTCGGCCTG
ACCGAGGCCG CGAGCGCCTA TCTCAAGCGC CCGGTCGGGG TCGGCGCCAT CGTGGCGGAG
GTCGTCGACG CGCCGGCCGC GCCGGCCACC AGCCCGTTCG CCGATGTCGG CGTCGATACC
TCGCCGTGCG ACGGCTTCAA GGTCGACCCC GGCACCAATG TGCTGAAGCT GGTGATCTAT
CTCGGCGATG TCGGCGCCGG CAACGGCCCG CTGACCTATG TGGCCGGCAG CAACCGCGCC
GCGACGCGGT TCTGGGACGG GCTGATCCGC CGCGCCAACG ACCTCGCCGG CCTGTCCTCG
ACGCTGCAGA CCTGGCGCGA GACCTTCTAT GCGCTGCCCG CCGGATTGCA GCGCAAGGCG
GCGTTCGGCG CCGACCTGGT CGCCGACAGC AATTTCGCCG CGGCGATCGA GGCCAACCAG
GTCGCCGTGA CCAGCCGCGA CGGCAACGCC GTGCTGTACG ATCCGGCCGG CATCCACCGC
GACGCTGCCT TGACGCAGGG CCGTCGCACC GCAGTGATCG TCACCTTCAC CGAACTGCCG
CGCTGA
 
Protein sequence
MQSEGKSYPF DHLPAIDYDA HPAYGRVMSM PMLGARLKAI SYFSYGFLLA SAQRLIDIEH 
LPRPAEAGKT FVAVLRNLPT TLRQILLQRL ARVTAGQAYA PKTERGTAVF VPLQGDGFAV
TRLGADAIAQ IRTQLAPQLT TLEQRATPAG DPASSRMAID PAVAPDLYRW FNQTAADLGL
TEAASAYLKR PVGVGAIVAE VVDAPAAPAT SPFADVGVDT SPCDGFKVDP GTNVLKLVIY
LGDVGAGNGP LTYVAGSNRA ATRFWDGLIR RANDLAGLSS TLQTWRETFY ALPAGLQRKA
AFGADLVADS NFAAAIEANQ VAVTSRDGNA VLYDPAGIHR DAALTQGRRT AVIVTFTELP
R