| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0292 |
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| Symbol | |
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| ID | 3907920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 331635 |
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| End bp | 332237 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637882175 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_483914 |
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| Protein GI | 86747418 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0314378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGCTTT CGGGACGCGG ACTGAGGTGT GTGCGAGGCG GCCGCGAGGT GTTCGACGGA
CTCGATTTCG AGGCCGCCGG CGGCGAGGCG CTGGCGCTGA TCGGCCGTAA CGGCGCCGGC
AAGACGTCGT TGCTGCGGTT GATCGCCGGC CTGCTGATGC CGGCGGCGGG TAGTATCGAC
TTCGACGGCA GCGAGCCGGA CACGCCGGTG GCCGAGCAGG CGCATTACCT CGGCCATCGC
GACGCGTTGA AGCCGTCGCT CAGCGTCGTC GAAAATCTCG CGTTCTGGCG CGACTTTCTC
GGCGGCGAAC CGACCGATCT GATGGCCGGG ATCACCGCCG TGGGGCTGTC GCACGCCGCG
GAACTGCCGG CGGCTTATTT GTCCGCCGGC CAGCGCCGGC GGTTGTCGAT CGCGCGACTG
CTGGTTGTGC GCCGGCCGAT CTGGCTGCTC GACGAGCCGA CCTCGGCGCT CGACGTCAGG
GGTCAGGCCA TGTTCGCTCG GCTGATGAGC GACCACCTCG CAAGCGGCGG CCTGATCGTC
GCCGCCACTC ACAGCCCGCT CGGCATCACC ACGCGCGAGA TGCGGATCGG AGCGGCGGCG
TGA
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| Protein sequence | MRLSGRGLRC VRGGREVFDG LDFEAAGGEA LALIGRNGAG KTSLLRLIAG LLMPAAGSID
FDGSEPDTPV AEQAHYLGHR DALKPSLSVV ENLAFWRDFL GGEPTDLMAG ITAVGLSHAA
ELPAAYLSAG QRRRLSIARL LVVRRPIWLL DEPTSALDVR GQAMFARLMS DHLASGGLIV
AATHSPLGIT TREMRIGAAA
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