Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0290 |
Symbol | |
ID | 3907918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 327784 |
End bp | 328617 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637882173 |
Product | hypothetical protein |
Protein accession | YP_483912 |
Protein GI | 86747416 |
COG category | [S] Function unknown |
COG ID | [COG5429] Uncharacterized secreted protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.838971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0132411 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCGCC TTTTCGTTTT AAGGCGCTCC CGAACGACGG TGGAAGCCGT CGTCACCTGC TCCCATGCAA AGGCGATGAT GATCGGTGTA GATGGCTTTT CGCGATGGTC CGGCGCCCTC GGTCTGTGCG CGCTGATCGC GATGGTTCGT CCCAGCGCCG CCGATCCGCG CGCGGTGGTG GAACTGTTCA CGTCGCAGGG CTGCTCGTCG TGCCCGCCGG CCGACCGGAT CATCGGCGAG CTCGCCCGCG ATCCGTCGAT CATCGCGCTG AGTATGCCGA TCGATTACTG GGACTATCTC GGCTGGAAGG ACACGCTGGC GGATTCCCGC TTCAGCGCCC GGCAGAAAGC CTATTCGCAG ATGCGCGGCG ATCGCGACGT GTACACGCCG CAGGTCATCG TCAACGGCCA GACGCATCTG GTCGGCAGCA ACCGCGTCGG CATCGACGGG GCGATCAAGA GCACCGATCA GATCCCCGGC ACGATGACGG TGCCGGTGCG GATGGCGGTC AATGGCAAGG AGATCAAGGT TTCGGTCGCG GCGGCGCCCC CCGGGGAGAG AGTCGCGCAG GGCGAGGTCT GGATCTGTTC GGTCTCGAAG GCGGTGCCGA TCGCGATTGC ACGCGGCGAG AACCGCGGCC GCGAGGTCGT GTATCACAAC GTCGTCCGCA ACCTGCTCAA GGTCGGCGAC TGGAACGGCG CCGCCGGCAG TTGGTCGGTG CCGCTGGAAA ACATCGCCCA TGACGGCATC GATGCCGCCG CGGTCTATGT CCAGGACGGC AACCGCGACA GGCCGGGCGC GATGCTCGGC GCGGCCTTCA CGTCGCTGCA CTGA
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Protein sequence | MGRLFVLRRS RTTVEAVVTC SHAKAMMIGV DGFSRWSGAL GLCALIAMVR PSAADPRAVV ELFTSQGCSS CPPADRIIGE LARDPSIIAL SMPIDYWDYL GWKDTLADSR FSARQKAYSQ MRGDRDVYTP QVIVNGQTHL VGSNRVGIDG AIKSTDQIPG TMTVPVRMAV NGKEIKVSVA AAPPGERVAQ GEVWICSVSK AVPIAIARGE NRGREVVYHN VVRNLLKVGD WNGAAGSWSV PLENIAHDGI DAAAVYVQDG NRDRPGAMLG AAFTSLH
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