Gene RPB_0243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0243 
Symbol 
ID3907870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp276777 
End bp278084 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content65% 
IMG OID637882125 
ProductMFS permease 
Protein accessionYP_483865 
Protein GI86747369 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAA CCACGACGGC GGGACTTGGC TCTGATCCGG CGCACAAGCA GGCCAACCCC 
GGCGAGATTG CGATCGGCGT CATCATCGGG CGCACCGCCG AATTCTTCGA CTTCTTCGTC
TACGCGATCG CCTCGGTGAT CGTGTTTCCG CGGCTGGTGT TTCCGTTCGC CAGCGAGCTG
ACCGGCACGC TGTATGCGTT CGCGATCTTC GCCGTCGCCT TCATTGCGCG GCCGCTCGGC
ACCGTGATCT TCATGGCGAT CGACCGCCGC TATGGCAAAA GCGCCAAGCT GATCAGCGCG
ATGCTGCTGC TCGGCACCGC CACGGTCGCG ATCGCCTTCC TGCCCGGCTA TTCCGAAATC
GGCGCGGCCT CGATCTGGCT CTTGGCGCTG GCGCGTGCGG CGCAGGGTCT CGCCTGGGGC
GGCGCCTGGG ATGGTATGGC ATCGTTGCTG GCGCTCAACG CCCCCAAGGA GCAGCGCGGC
TGGTACGCGA TGGTGCCGCA GCTTGGCGCG CCGCTCGGGT TGATCGTCGC GAGCGCGCTG
TTCGCCTATT TCACCGGTCA TTTGTCGTCG GAGGACTTCT TCGGCTGGGG CTGGCGCTAT
CCGTTCTTCG TCGCCTTCGC CATCAACGTC GTGGCGCTGT TCGCGCGGCT GCGCATGGTG
GTGACGCCGG AATATGCGTC GCTGTTCGAA AGCCGCGAAT TGCAGCCCAG CCGCGTTCTC
GCAACGCTCG GGCACGACGG CCGCAACATC ATCATCGGGG CGTTCGCACC GCTGGCGAGC
TTCGCCCTGT TTCATATGGT CACGGTGTTT CCGCTGTCCT GGGTGTTCCT GTTCACCCGT
GAAAGCCCGG TGCGGTTCCT GATCATCGAG ACCATCGGCG CGATGTTCGG CGTCGCGGCG
ATCATCGCGT CGGGCATGCT CGCCGATCGC ATCGGCCGCA AGCCGTTGCT GATGGGCTCG
GCGATCGCGA TCGCGGTGTT CAGCGGCTTC GCCCCGCAGA TGCTCGATGC CGGCCCGGTC
GGCGAGACCG CCTATATGAT CCTCGGCTTC ATTCTGCTCG GATTGTCGTT CGGCCAGTCG
TCCGGCGTGA TCGCTTCCAG CTTCCGGACC GCCTATCGCT ACACCGCCTC CGCGCTGACC
GCCGACCTCG CCTGGCTGTT CGGCGCAGGC TTCGCCCCGC TGGTCGCCCT GCTGCTCGCC
ACCGATTTCG GCCTGATCTC GTCGGGCGCC TATCTGCTGT CCGGCGCGGT GGTGACCATT
CTGGCGCTGT ACATCAGCGG GTTGCGGGAG TCGGAAGAAT ATCGTTAG
 
Protein sequence
MTETTTAGLG SDPAHKQANP GEIAIGVIIG RTAEFFDFFV YAIASVIVFP RLVFPFASEL 
TGTLYAFAIF AVAFIARPLG TVIFMAIDRR YGKSAKLISA MLLLGTATVA IAFLPGYSEI
GAASIWLLAL ARAAQGLAWG GAWDGMASLL ALNAPKEQRG WYAMVPQLGA PLGLIVASAL
FAYFTGHLSS EDFFGWGWRY PFFVAFAINV VALFARLRMV VTPEYASLFE SRELQPSRVL
ATLGHDGRNI IIGAFAPLAS FALFHMVTVF PLSWVFLFTR ESPVRFLIIE TIGAMFGVAA
IIASGMLADR IGRKPLLMGS AIAIAVFSGF APQMLDAGPV GETAYMILGF ILLGLSFGQS
SGVIASSFRT AYRYTASALT ADLAWLFGAG FAPLVALLLA TDFGLISSGA YLLSGAVVTI
LALYISGLRE SEEYR