Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0233 |
Symbol | |
ID | 3907860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 266445 |
End bp | 267473 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637882115 |
Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
Protein accession | YP_483855 |
Protein GI | 86747359 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCTC AGCAACAGAA CCACGCCGAC GCCGGCATTC TCGCGGTGCG CGATCTGCGC ATCCTGTTTC CGTCGCGCGA TGGCCGGGAC ACCGTCAAGG CGATCGACGG TATGGATTTC GAGGTCCGCA GCGGCGAGAC GTTCGGCATC ATCGGCGAAT CCGGCTCCGG CAAGACCACG CTCGGGCGCG CTCTGGTGTC GCTGCTGCGG CCGACTCACG GCCACATCCT GCACGACGGC ACCGATCCGG CGACGCTCGG CAGCCGGGCG TTCCGCAAGC ATCGCCGCGA CTATCAGATC ATCTTTCAGG ATCCGAATGC CGCGCTCAAT CCGCGGATGA CGATCATCGA CAGCGTTGTC GAGCCGCTGG AAGTTCTCGG TGAGGGCAAC GCCGCCTCGC GCCGCCGTCG CGGCATCGCG GTGCTGGAGC GCGTCGGGCT CTCCGCCGAG GCGGCCGATC GCTATCCGCA TCAGCTCTCG GGCGGCCAGA AGCAGCGCGT CAACATCGCG CGGGTGCTGA CGCTGCGACC CAAGGTGATC GTCTGCGACG AGGTCGTCGC GGCGCTCGAC GTCTCGATTC GCGGCGACGT GCTCAACCTG TTCGCCGATC TGCAGCGCGA ATTCGGCCTC ACCTATGTGT TCATCACCCA CGACATTTCG GTGGTGTCGC ACATCTCCGA TCGCATCGCG GTGACCTACC TCGGCAAGCT GATGGAGCTC GGCCCCGCCG AGGACGTCGT CGAGCGGCCG CTGCATCCCT ACACGCGCGC GCTGCTCTCA GCCGAGCCGA TCCCGCTGCC GTCGCATCTG CGGGTCGATC GCCGCATCAT TCTCGAAGGC GAGATTCCGA GCCCGGTATC GCCGCCGTCG GGCTGCCGCT TCCGCACGCG CTGCCCGTCG GTGCAGCCGC GTTGCGCAGA CGAGGTGCCG GCCTGGCGCG ACGTCAGGCC GGGCCATCGC GTCGCCTGTC ACTTCGCGAC GGCCGAAGGG CCGCCGGCCG ACAATCAACA GGCGCGATCC GCGTCGTAA
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Protein sequence | MAAQQQNHAD AGILAVRDLR ILFPSRDGRD TVKAIDGMDF EVRSGETFGI IGESGSGKTT LGRALVSLLR PTHGHILHDG TDPATLGSRA FRKHRRDYQI IFQDPNAALN PRMTIIDSVV EPLEVLGEGN AASRRRRGIA VLERVGLSAE AADRYPHQLS GGQKQRVNIA RVLTLRPKVI VCDEVVAALD VSIRGDVLNL FADLQREFGL TYVFITHDIS VVSHISDRIA VTYLGKLMEL GPAEDVVERP LHPYTRALLS AEPIPLPSHL RVDRRIILEG EIPSPVSPPS GCRFRTRCPS VQPRCADEVP AWRDVRPGHR VACHFATAEG PPADNQQARS AS
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