| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0230 |
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| Symbol | |
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| ID | 3907857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 262969 |
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| End bp | 263847 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637882112 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_483852 |
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| Protein GI | 86747356 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATG TGGCGATGAC GGCAATGGCG CATCGGCCGC GACGGATGCG GCGTTTCGTG
CGGTGGTTCG TCTCCGACAT CCGCGGCGCG GTCAGTCTGA CGTTCCTGCT GGTGCTGCTG
GTGATCTCTC TGCTCGCGCC GTGGATCTCG CCCTACGATC CGGTCGCGCA GGATGTCGAC
GCGGCGCTGG CGCCGATGTC GGCGGCGCAT TGGCTCGGCG CCGACGATCT CGGCCGCGAC
ACGCTGAGCC GCCTGATCTA CGGCGGGATG GCGTCGCTGT ATGCGAGCTT CCTCGCGGTC
GCGATCGCAG TGCTGATCGG CGTGCCGATC GGCGTGCTCG CCGGCTATCT CGGCGGCTGG
GTCGATACCA TGATCAGCCG TGTCATCGAC AGCTTCCTGT CGTTCCCCGC CATCGTGCTG
GCGATCGCCG TCACCGGCGC GCTCGGCATC GGACTCACCA ACGGCATGAT CTCGGTCGGC
ATCGTGTTCG CGCCGCAACT CGCGCGGCTG GTCCGCGCGC GCACGCTGGT GGTTCGCCAC
GAACTCTATG TCGACGCCGC GCGCTGTTTC GGCGGCTCCA CCGGCCGCAT CCTGTGGCGT
CACGTGCTGC CCAACGCGAT CCAGCCGGTG ATCGTGCAGG TGACATTGCT GCTGGCGGCG
GCGCTGCTCG CCGAAGCCAG CCTCAGCTTC CTTGGCCTCG GCATTCAGCC GCCCGATCCG
AGCTGGGGCG CGATGCTGGC GCGGGCCTAT CAGAACATGG AGATCGCGCC GGAGCAGATG
TATCCGCCGG GGCTCGCCAT CCTGTTCACC GCGCTCGCCT ACAACACGCT CGGCGAATCG
CTGCGCGTCG CGCTCGACCC GACCATGAAG CGCAACTGA
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| Protein sequence | MTDVAMTAMA HRPRRMRRFV RWFVSDIRGA VSLTFLLVLL VISLLAPWIS PYDPVAQDVD
AALAPMSAAH WLGADDLGRD TLSRLIYGGM ASLYASFLAV AIAVLIGVPI GVLAGYLGGW
VDTMISRVID SFLSFPAIVL AIAVTGALGI GLTNGMISVG IVFAPQLARL VRARTLVVRH
ELYVDAARCF GGSTGRILWR HVLPNAIQPV IVQVTLLLAA ALLAEASLSF LGLGIQPPDP
SWGAMLARAY QNMEIAPEQM YPPGLAILFT ALAYNTLGES LRVALDPTMK RN
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