| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0200 |
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| Symbol | |
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| ID | 3909441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 223625 |
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| End bp | 224761 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637882081 |
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| Product | oxalate decarboxylase |
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| Protein accession | YP_483822 |
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| Protein GI | 86747326 |
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| COG category | [G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2140] Thermophilic glucose-6-phosphate isomerase and related metalloenzymes |
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| TIGRFAM ID | [TIGR03404] bicupin, oxalate decarboxylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.284083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCA CCACCGATTT CCAGCCGGTT CGCGGCGCGT ACGGCGCGAG CGATCCCGGG
CCGCGCAATC TGGCGCTCGA TCTGCAGAAC CCCGACATTT TCATTCCGCC GCCCACCGAC
AATGGGTCGC TTCCCAACCT GAAATTCTCG TTCGGCATGG CGCATAACCG GCTCGAGGCC
GGAGGCTGGG CGCGCGAGGT GACGGTCCGA GAACTGCCGG CCGCAAAGGG CATGGCCGGA
GTCGACATGC GCCTTGGTCC CGGCGTGGTC CGCGAGTTGC ACTGGCACAA GGAAGCCGAA
TGGGGCTACG TGCTCGACGG TCGCTGCCGC GTCACCGTCG TCGACCCCGA CCGCGGGGTC
TATGTCGACG ACCTTCAGGC CGGCGATATC TGGCTGTTCC CCTCCGGCAT ACCGCATTCG
ATCCAGGCCC TGGAAGAGGG TTGCGAATTC CTGCTGGTGT TCGACGACGG CAATTTCTCC
GAGAACGAGA CCCTGCTGGT GACGGAGTTG ATGGCGCATA TGCCGATCGA CGTGGTCGCC
AAGAATTTCG GCATTCCGCA GCAGCATTTC GCCAATCTCC CGCCGAAGGA GAAGTACATC
TTCCCGCTTC CCGTCCCGCC GCCGCTCGAC GAGGTTCTCG CCAAACTGCC GCCGAAGCGG
CCCGCGATGC CGTTCACGGT CCATCGTGGT GACTTCACGC CGACGCAATG GGATGGCGGC
AAGACCACGA TAATCGATGT CCGGAACTTT CCGGTAACCA ACATGGCGGC GCTGATCATC
GATCTGGAGC CGGGCGCATT GCGCGAAATC CACTGGCATC CCGACGCGGA CGAATGGCAA
TACTACATTC AGGGCGAAGC GCGGATGACC GTGTTCGACG CCACCTCGAA GGCGCGGACG
TTCAACTATC GCGCCGGCGA CGTCGGCTAC GTGCCGAAGA CTCTCGCGCA CTACATCGAG
AATATCGGCA CGACCCCGGT CCGGGTGCTG AACGTCTTCA ACAAGCCGCT GTTCAAGGAC
GTCCCGCTGA ATCAGTGGCT GGCTTTGACT CCGCCCGACC TGGTCCGGGG CCATCTCGGT
CTCGATGACG TGGCCATGGC GGCGCTCGAT CGGAATCCAC GCTCAGTCGT GCGTTGA
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| Protein sequence | MPITTDFQPV RGAYGASDPG PRNLALDLQN PDIFIPPPTD NGSLPNLKFS FGMAHNRLEA
GGWAREVTVR ELPAAKGMAG VDMRLGPGVV RELHWHKEAE WGYVLDGRCR VTVVDPDRGV
YVDDLQAGDI WLFPSGIPHS IQALEEGCEF LLVFDDGNFS ENETLLVTEL MAHMPIDVVA
KNFGIPQQHF ANLPPKEKYI FPLPVPPPLD EVLAKLPPKR PAMPFTVHRG DFTPTQWDGG
KTTIIDVRNF PVTNMAALII DLEPGALREI HWHPDADEWQ YYIQGEARMT VFDATSKART
FNYRAGDVGY VPKTLAHYIE NIGTTPVRVL NVFNKPLFKD VPLNQWLALT PPDLVRGHLG
LDDVAMAALD RNPRSVVR
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