Gene RPB_0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0158 
Symbol 
ID3907763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp170790 
End bp171284 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content67% 
IMG OID637882040 
Producthypothetical protein 
Protein accessionYP_483781 
Protein GI86747285 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.286891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCGT GGCTGAAGGC CATCCACATT CTGGCGCTGA TCGTGTGGTG CGCCGGGCTG 
CTGGTGCTGC CGGGCCTGTT TGCCCAGCGC AGCCGGCTCG GCCGCGGCCC TGCGGTCGAG
CTGAACCGCT TCACCCGGAC GCTGTTCATC GCCGTCACCT CGCCGGCGGC GTTCGTGGCG
GTGGTGGCGG GGACGACGCT GCTGTTCATG CGCGAGGTCT TCACCACCTG GATGATGCTG
AAGCTCCTCG CCGTCGGGCT GCTGGTGATC ATCCACATGC GGGCCGGCTA TTTGATCCTG
AGCGTGTTCG AACCGGAGGG CTACTACGCG CCGTGGCGGC GCTGGGTGAT GACCGTCGTG
ACGGTCGCGG TGATCGGCGT CATCCTGGTG CTGATCCTCG ACAAGCCTGC GATCGAAACC
GCGGCCTTTC CGCCATGGAT GCGGCAGCCC GGGGGACTTC AGTCCTTCGT CGAGACCATC
AGGCCGATGC CGTGA
 
Protein sequence
MIAWLKAIHI LALIVWCAGL LVLPGLFAQR SRLGRGPAVE LNRFTRTLFI AVTSPAAFVA 
VVAGTTLLFM REVFTTWMML KLLAVGLLVI IHMRAGYLIL SVFEPEGYYA PWRRWVMTVV
TVAVIGVILV LILDKPAIET AAFPPWMRQP GGLQSFVETI RPMP